Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zoysia_20japonica_20[genbank_20GCA_5F001602275.1_202016-03-15]
11,786 sequences; 334,384,427 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq604 98.7 9e-19
seq615 78.8 9e-13
>seq604
Length=5385
Score = 98.7 bits (108), Expect = 9e-19
Identities = 88/109 (81%), Gaps = 1/109 (1%)
Strand=Plus/Minus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| ||| | |||||| ||||||||| || |||||||||||| ||||
Sbjct 3110 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCCTGCGAAAAGCTGCGGG 3051
Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115
|| ||||| | | | |||||||| |||||||||||||||| ||||||
Sbjct 3050 GAGCTGGCAAACAAGCTTTGATCCGCAGATATCCGAATGGGGAAACCCG 3002
>seq615
Length=5227
Score = 78.8 bits (86), Expect = 9e-13
Identities = 82/108 (76%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 7 CGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGG 66
|||||||||||| ||| || ||||||| |||||||||| || ||||||| |||| ||
Sbjct 2064 CGGTGGATGCCTTGGCGCTGAGAGGCGATGAAGGACGTGGTACGCTGCGATAAGCCTTGG 2123
Query 67 GGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
||| || | | ||||||| ||| ||||||||||| |||||
Sbjct 2124 GGAGCTGCGAACGAGCTTTGATCCAGGGATTTCCGAATGGGGAAACCC 2171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476745560466
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |