Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20japonica_20[genbank_20GCA_5F001602275.1_202016-03-15] 11,786 sequences; 334,384,427 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq604 648 0.0 seq615 307 3e-81 seq11097 212 2e-52 seq1992 201 3e-49 seq1565 127 5e-27 seq158 127 5e-27 >seq604 Length=5385 Score = 648 bits (718), Expect = 0.0 Identities = 388/407 (95%), Gaps = 0/407 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct 4699 TACCGGAAGAATAAGGACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTCC 4640 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| Sbjct 4639 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGCAAGACCGATGT 4580 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||||||| Sbjct 4579 GAAATCCCCGAGCTTAACTTGGGAATTGCATTGGTGACTGCACGGCTAGAGTGTGTCAGA 4520 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 ||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| |||| Sbjct 4519 GGGGGGTAGAATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATGG 4460 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4459 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 4400 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | | Sbjct 4399 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGTTGTTGGGGATTCATT 4340 Query 363 TCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 4339 TCCTTAGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAGTAC 4293 >seq615 Length=5227 Score = 307 bits (340), Expect = 3e-81 Identities = 317/411 (77%), Gaps = 8/411 (2%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| || |||||||| |||||||||| |||||||||||||||||||||||| |||| || Sbjct 543 TACCGGAGGAATAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGC 602 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||| ||||||| ||||||||||||| | ||| |||||| | |||| | || || Sbjct 603 TAGCGTTGCTCGGAATCACTGGGCGTAAAGGGCGCGTAGGCGGCGTTTTAAGTCGGGGGT 662 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACT-GCACGACTAGAGTGTGTCAG 181 |||| || |||| |||| |||| || || | ||| | ||| || |||| || || Sbjct 663 GAAAGCCTGTGGCTCAACCACAGAATGGCCTTCGATACTGGGACG-CTTGAGTATGGTAG 721 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 ||| ||||||| | | |||||| ||||||| ||||||||| | | ||||||| || Sbjct 722 AGGTTGGTGGAACTGCGAGTGTAGAGGTGAAATTCGTAGATATTCGCAAGAACACCGGTG 781 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 |||||||| ||| |||| | ||||||||| | || ||||||||||||||||||||| Sbjct 782 GCGAAGGCGGCCAACTGGACCATTACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACA 841 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTAC 361 ||||||||||||||||||||||||||| |||||||| | || |||||||| | | Sbjct 842 GGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATGCCAGCTGTTGGGG---TGC 898 Query 362 TT---CCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || ||| || ||||||||| | || ||||||||||| ||| Sbjct 899 TTGCACCGCAGTAGCGCAGCTAACGCTTTGAGCATTCCGCCTGGGGAGTAC 949 >seq11097 Length=530 Score = 212 bits (234), Expect = 2e-52 Identities = 293/409 (72%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 21 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 80 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 81 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 140 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| |||| |||| ||| || | | ||| | || |||| | || Sbjct 141 CAAATCCCATGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 200 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| | || || | | ||||||||| || Sbjct 201 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCAGAAAGAACACCAACGG 260 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| ||||| |||||||| || | |||||||| |||||||||| | Sbjct 261 CGAAAGCACTATGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 320 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 ||||||| |||| ||||||| ||| |||||||| ||||| || || | | Sbjct 321 GATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGA 380 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 ||| || || ||||||||||||| |||| ||||||||||| ||| Sbjct 381 TCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 429 >seq1992 Length=2020 Score = 201 bits (222), Expect = 3e-49 Identities = 247/334 (74%), Gaps = 10/334 (3%) Strand=Plus/Plus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||| |||| |||||||||| |||||||||||||||||||| ||| ||| ||||| | Sbjct 276 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTG 335 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT---TGTGTAAGACAGGTGTGA 124 || ||||||| ||||||||||||| | || ||||||| | | || || ||| Sbjct 336 TTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAG---TGA 392 Query 125 AATCCCCGGGCTTAACCTGG-GAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAG 183 || | | | || ||| | | ||| | | || ||| ||||| | ||||| Sbjct 393 AAGTCGC---CAAAAAGTGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAG 449 Query 184 GGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGC 243 | | |||||||| | |||||| ||||||| ||||||| | | |||||| |||| || Sbjct 450 GAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGTAGATCTACGAAGGAACGCCAAAAGC 509 Query 244 GAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGG 303 ||||||||| | ||||| || |||||| | ||||||| |||||||| |||||| Sbjct 510 GAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACAGG 569 Query 304 ATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||||||||||| ||| |||||||| Sbjct 570 ATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 603 >seq1565 Length=2380 Score = 127 bits (140), Expect = 5e-27 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 188 GTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAG 247 |||||||| | |||||| ||||||| ||||||| | | |||||| |||| |||||| Sbjct 123 GTGGAATTTCGTGTGTAGGGGTGAAATCCGTAGATCTACGAAGGAACGCCAAAAGCGAAG 182 Query 248 GCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTA 307 ||||| | ||||| || |||||| | | ||||| |||||| |||||||||||| Sbjct 183 GCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCAAAAGCATGGGGACCAAACAGGATTA 242 Query 308 GATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||||||| ||| ||||| || Sbjct 243 GATACCCTGGTAGTCCATGCCGTAAACAAT 272 >seq158 Length=370920 Score = 127 bits (140), Expect = 5e-27 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 188 GTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAG 247 |||||||| | |||||| ||||||| ||||||| | | |||||| |||| |||||| Sbjct 64009 GTGGAATTTCGTGTGTAGGGGTGAAATCCGTAGATCTACGAAGGAACGCCAAAAGCGAAG 63950 Query 248 GCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTA 307 ||||| | ||||| || |||||| | | ||||| |||||| |||||||||||| Sbjct 63949 GCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCAAAAGCATGGGGACCAAACAGGATTA 63890 Query 308 GATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||||||| ||| ||||| || Sbjct 63889 GATACCCTGGTAGTCCATGCCGTAAACAAT 63860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289448007744