Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq8139 87.8 2e-15 seq1900 87.8 2e-15 seq2891 82.4 8e-14 seq4914 77.0 3e-12 >seq8139 Length=8804 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| || | | ||| || Sbjct 122 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCGCAAAAGG 63 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 62 G-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 14 >seq1900 Length=91562 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||||||||||||| || || |||| || | | ||| || Sbjct 64712 TAAGGAACTCGGCAAAATAGCCCTGTAACTTCGAGAGAAGGGGTGCCCCCTCGCAAAAGG 64771 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 64772 G-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 64820 >seq2891 Length=63605 Score = 82.4 bits (90), Expect = 8e-14 Identities = 85/110 (77%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||| ||| || |||| || | | ||| || Sbjct 47988 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCAGGAGAAGGGGTGCCCTCTCGCAAAAGG 48047 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 48048 G-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 48096 >seq4914 Length=31598 Score = 77.0 bits (84), Expect = 3e-12 Identities = 85/112 (76%), Gaps = 5/112 (4%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT--CCCTACCCAGAAAT 137 ||| ||||| |||||| || ||| ||||||| |||| || |||| ||| | || ||| Sbjct 431 TAAAGAACTCGGCAAAATGGCCCCGTAACTTTGGGAGAAGGGGTGCCCCCTCGCAAAAA- 373 Query 138 GGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 |||| ||||| || ||| || || |||||||| |||||||||||| || Sbjct 372 --GAGGTCGCAGTGACCAGGCCCGAGCGACTGTTTACCAAAAACACAGGTCT 323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531129968086