Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq2891 84.2 2e-14 seq45 84.2 2e-14 seq4914 78.8 9e-13 seq670 75.2 1e-11 >seq2891 Length=63605 Score = 84.2 bits (92), Expect = 2e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| || ||||| || Sbjct 48049 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTTCGCAAAGTCGT 48108 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 48109 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 48154 >seq45 Length=405252 Score = 84.2 bits (92), Expect = 2e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 294371 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 294430 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| ||| |||||||| || Sbjct 294431 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGTCGGAAGGTCAA 294476 >seq4914 Length=31598 Score = 78.8 bits (86), Expect = 9e-13 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| || ||||| || Sbjct 370 GGTCGCAGTGACCAGGCCCGAGCGACTGTTTACCAAAAACACAGGTCTTCGCAAAGTCGT 311 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||| ||||| || Sbjct 310 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGAAAGGTCAA 265 >seq670 Length=169987 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| ||||||| || || ||||| || Sbjct 77555 GGTCGCAGTGACCAGGCCCGAGCGACTGTTTACCAAAAACATAGGTCTTCGCAAAGTCGT 77614 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||| ||||| || Sbjct 77615 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGAAAGGTCAA 77660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476737140029