Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15]
13,609 sequences; 563,438,595 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq3208 201 3e-49
seq386 188 2e-45
seq4213 129 2e-27
seq205 93.3 1e-16
>seq3208
Length=55487
Score = 201 bits (222), Expect = 3e-49
Identities = 191/242 (79%), Gaps = 3/242 (1%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| |||||||||||| ||||||||||| |||||||||| |||| |||||
Sbjct 25443 TACGTTCGCAAGAATGAAACTCAAAGAAATTGACGGGG-CCCGCACAAGTGGTGAAGCAT 25501
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||| | |||| ||||||||| |||||| ||||| || | || ||||
Sbjct 25502 GTGGTTTAATTCAATGCAAAGCGAAGAACATTACCAGGGCTTGATATGCCACGAATCCTC 25561
Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180
| || | ||| | | |||| ||| ||| | |||||| ||| ||| |||||||||
Sbjct 25562 TTGAAAGAGAAGGGTGCCCTC--GGGAACACGGACGCAGGTGGTGCCTGGCTGTCGTCAG 25619
Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240
|||||| ||| || |||||||||||||| |||||||| ||||||| | | ||||||||
Sbjct 25620 CTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAACGCAACCTTCGTGTTTAGTTGC 25679
Query 241 CA 242
||
Sbjct 25680 CA 25681
>seq386
Length=211193
Score = 188 bits (208), Expect = 2e-45
Identities = 189/242 (78%), Gaps = 5/242 (2%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| |||||||||||| |||||| |||| |||||||| ||| |||||
Sbjct 210449 TACGTTCGCAAGAATGAAACTCAAAGAAATTGATGGGG--CCGCACAAATGGTAAAGCAT 210506
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||||| |||| |||||||||||||||| | ||| | || | || ||||
Sbjct 210507 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGAGCTT-ATATGCCGCGAATCCTC 210565
Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180
| || | ||||| | |||| ||| ||| | |||||| ||| ||| ||||||||
Sbjct 210566 TTGAAAGAGAGGGGTGCCCTC--GGGAACACGGACGCAGGTGGTGCCTGGCTGTCGTCAA 210623
Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240
|||||| | | || |||||||||||||| |||||||| ||||||||| | ||||||||
Sbjct 210624 CTCGTGCCATAAGGTGTTGGGTTAAGTCTCGCAACGAACGCAACCCTCGTGTTTAGTTGC 210683
Query 241 CA 242
||
Sbjct 210684 CA 210685
>seq4213
Length=39809
Score = 129 bits (142), Expect = 2e-27
Identities = 82/89 (92%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 7104 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 7163
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAAC 89
|||||||||||||| |||| |||||||||
Sbjct 7164 GTGGTTTAATTCGATGCAAAGCGAAGAAC 7192
>seq205
Length=265618
Score = 93.3 bits (102), Expect = 1e-16
Identities = 58/61 (95%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 8 GCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTT 67
||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 219723 GCAAGAATGAAACTCAAAGGAATTGACGGGG-CCCGCACAAGCGGTGGAGCATGTGGTTT 219665
Query 68 A 68
|
Sbjct 219664 A 219664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503795320640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |