Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq853 226 5e-57 seq6884 217 3e-54 >seq853 Length=150616 Score = 226 bits (250), Expect = 5e-57 Identities = 155/175 (89%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 89068 GAATTCTGCTTCACAATGATAGGAAGAGCCGACATCAAAGGATCAAAAAGCAACGTCGCT 89127 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||| | ||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct 89128 TTGAACGCTAGCCTGCCACAAGCTAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGC 89187 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||| | | || |||||||||| ||||||| | |||||| ||||||||||| Sbjct 89188 TTCAAACCCCAAAGGCCTAAAGGATCTATAGGCCCCGCTTTCACGGTTTGTATTC 89242 >seq6884 Length=15222 Score = 217 bits (240), Expect = 3e-54 Identities = 143/157 (91%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10108 ATAGGAAAAGC-GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 10166 Query 197 CAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACT 256 ||||||||||||| ||||||||||||||||| |||||||||| ||||| ||| || || Sbjct 10167 CAAGCCAGTTATCTCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAACCCCGAAGGCCT 10226 Query 257 AAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||| |||||||||||||| |||||| |||| |||||| Sbjct 10227 AAAAGATCGATAGGCCACGCTTTCACGGTTCGTATTC 10263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854283724704