Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq4914 98.7 1e-18 seq1900 86.0 7e-15 >seq4914 Length=31598 Score = 98.7 bits (108), Expect = 1e-18 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 50 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 109 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||| ||| |||||||||||||||| Sbjct 110 C-CTCTCTCCGAGACAGTGCCCAGATTGTTACGCCTTTCTTGCGGGTCGGAACTTACCCG 168 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||| |||||||| Sbjct 169 ACAAGGAATTTCGCTACCTTAAGACCGTTA 198 >seq1900 Length=91562 Score = 86.0 bits (94), Expect = 7e-15 Identities = 108/150 (72%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || ||||||||| || | | ||||||| ||| Sbjct 65093 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCACATCTTCACAGACATGTCTATTTCACCGAG 65034 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||| ||||| ||| Sbjct 65033 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGGACTTATCCG 64975 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||| ||||||||| |||||||| Sbjct 64974 ACAAGGAATTTTGCTACCTTAAGACCGTTA 64945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547127858691