Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq2683 98.7 2e-18 seq4356 73.4 8e-11 >seq2683 Length=68896 Score = 98.7 bits (108), Expect = 2e-18 Identities = 77/91 (85%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 108 GTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTG 167 |||| |||| ||||||| |||||||||||||||| ||| ||| |||| |||| ||||| Sbjct 45267 GTCTTAGTTTCAGTGTGGTTGATCATCCTCTCAGATCAGCTACTGATCATCGCTTTGGTA 45326 Query 168 AGCCATTACCTCACCAACTAGCTAATCCGAC 198 || | || ||||||||||||||||||| ||| Sbjct 45327 AG-CTTTGCCTCACCAACTAGCTAATCAGAC 45356 >seq4356 Length=39161 Score = 73.4 bits (80), Expect = 8e-11 Identities = 76/97 (78%), Gaps = 7/97 (7%) Strand=Plus/Plus Query 108 GTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAG-TTACGGATCGTC-----GCC 161 |||| |||| ||||||| |||| ||||||||||| ||| |||| |||| || || Sbjct 26223 GTCTTAGTTTCAGTGTGGTTGATGATCCTCTCAGATCAGCTTACTGATCATCGCTTTGCT 26282 Query 162 TTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 ||||| || | || ||||| ||||||||||||| ||| Sbjct 26283 TTGGTAAG-CTTTGCCTCATCAACTAGCTAATCAGAC 26318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071854111520