Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq4585 125 2e-26 seq3737 113 1e-22 seq1155 100 7e-19 >seq4585 Length=36341 Score = 125 bits (138), Expect = 2e-26 Identities = 133/173 (77%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||||||| ||| |||| |||||| | ||| | |||| | || || | Sbjct 22006 CCACAGCTTCGGCAGATCGCTTA-GCCCCGTT-CATCTTTAGCGCAAGGGCGCTCGATTA 22063 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 | ||||||||| ||||||||| |||| |||||||||| | || |||||||||| ||||| Sbjct 22064 GGGAGCTATTATGCACTCTTTAAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTT 22123 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATG 379 ||| | |||| |||||| ||||||| || |||||||||||||||| || Sbjct 22124 TGCACCCCCACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTG 22176 >seq3737 Length=46926 Score = 113 bits (124), Expect = 1e-22 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 294 TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAG 353 |||||||||| | || |||||||||| ||||| ||| | |||| |||||| ||||||| Sbjct 46471 TGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTTTGCACCCCCACCTCCTTTATCACTGAG 46530 Query 354 TCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 46531 CGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 46577 >seq1155 Length=128362 Score = 100 bits (110), Expect = 7e-19 Identities = 188/266 (71%), Gaps = 18/266 (7%) Strand=Plus/Plus Query 63 GGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCTGC 121 |||| |||||| | |||| | | |||||| |||| | || |||||| ||| | Sbjct 60910 GGAAACCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTTCGTTACTCAAGCCGAC 60969 Query 122 ATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACG- 178 |||||| || ||| || || ||| | | | | ||| ||||| || || | || Sbjct 60970 ATTCTCGCTTCCGCTTCG--TCGACCCC-CGCTTTCGCGGTTGCTTC-CCTCTAAGGCGG 61025 Query 179 -ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCC 233 ||||||||||||| | || ||| | ||||||||||||| ||| |||| ||| Sbjct 61026 AACGCTCCCCTACCGATGCATTTTAACA---TCCCACAGCTTCGGCAGATCGCTTA-GCC 61081 Query 234 CCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA 293 ||| | ||| || |||| | || || ||||||||||||||||||||||| |||| Sbjct 61082 CCGTT-CATCTTCAGCGCAAGGGCGCTCGATCAGTGAGCTATTACGCACTCTTTAAAGGG 61140 Query 294 TGGCTGCTTCCAAGCCAACCTCCTGG 319 |||||||||| | || |||||||||| Sbjct 61141 TGGCTGCTTCTAGGCAAACCTCCTGG 61166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177439740416