Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq6313 89.7 9e-16 seq1987 84.2 4e-14 >seq6313 Length=20363 Score = 89.7 bits (98), Expect = 9e-16 Identities = 99/131 (76%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156 || |||| ||||||| | || || || || ||||| || |||||||||||||| || Sbjct 249 CATGGAATGCTTCTT-GAGGGATGTCAACAGATCCCACACGTTTCATGCGTTTTTTGCCT 191 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 ||||||||||||| |||| ||| ||| || | | || ||||| ||||| |||||| Sbjct 190 TCCTTTTGCTTCTCTAGCAACTTCTTCTTCCGAGTAATATCGCCGCCATAGCACTTGGCC 131 Query 217 AGTACGTTCTT 227 || || ||||| Sbjct 130 AGAACATTCTT 120 >seq1987 Length=87890 Score = 84.2 bits (92), Expect = 4e-14 Identities = 98/131 (75%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156 || |||| ||||||| | || || || || ||||| || |||||||| ||||| || Sbjct 249 CATGGAATGCTTCTT-GAGGGATGTCAACAGATCCCACACGTTTCATGCGCTTTTTGCCT 191 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 ||||||||||||| |||| ||| ||| || | | || ||||| ||||| |||||| Sbjct 190 TCCTTTTGCTTCTCTAGCAACTTCTTCTTCCGAGTAATATCGCCGCCATAGCACTTGGCC 131 Query 217 AGTACGTTCTT 227 || || ||||| Sbjct 130 AGAACATTCTT 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838285902144