Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq4213 145 2e-32 seq3208 118 3e-24 seq386 102 2e-19 seq205 82.4 2e-13 >seq4213 Length=39809 Score = 145 bits (160), Expect = 2e-32 Identities = 167/222 (75%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 188 GGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGC 247 |||||| | ||| ||||||||||||| | || || | | |||||||| |||||| || Sbjct 6885 GGAATTTCCGGTGGAGCGGTGAAATGCATCGAGATCGGAAAGAACACCAACGGCGAAAGC 6944 Query 248 GGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGA 307 |||||| | | |||||||||||| ||||||| |||||||||| |||||||| Sbjct 6945 ACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATTAGA 7004 Query 308 TACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCG-CATAAGTGCTC 366 |||| ||||||| ||||||||||||| |||||||||| | | ||| | | | Sbjct 7005 GACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTG-CTGTGCGACTCGACCCGTG 7063 Query 367 CGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | |||| | ||| ||||| ||||||| || ||||||||||| Sbjct 7064 CAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 7105 >seq3208 Length=55487 Score = 118 bits (130), Expect = 3e-24 Identities = 157/217 (72%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 131 GGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGA 190 |||||||||| || || | |||||| | ||| |||||| | || |||| ||| Sbjct 25198 GGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTGCGGTAGTGGCAGAGGGA 25257 Query 191 ATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGC 250 ||| | ||| || || ||||||| | || || | | |||||||| |||||| || Sbjct 25258 ATTTCCGGTGGAGTGGCGAAATGCATTGAGATCGGAAAGAACACCAACGGCGAAAGCACT 25317 Query 251 TTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATAC 310 |||||| | | ||| |||||||| || |||| |||||||||| ||||||| || Sbjct 25318 CTGCTGGGCCGACACTAACACTGAGAGACGTAAGCTAGGGGAGCAAATGAGATTAGAGAC 25377 Query 311 CCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTG 347 | | |||||| ||||||||||||| |||||||||| Sbjct 25378 C-TAGTAGTCTTAGCCGTAAACGATGGATACTAGGTG 25413 >seq386 Length=211193 Score = 102 bits (112), Expect = 2e-19 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 131 GGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGA 190 |||||||||| || || | |||||| | ||| |||||| | |||||| ||| Sbjct 210203 GGCTCAACCCTGGACAGGCAGTGGAAACTACCAAGCTGGAGTGCGGCAGGGGCCGAGGGA 210262 Query 191 ATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAG-GAACACCAGTGGCGAAGGCGG 249 ||| | ||| || || ||||| | || || | || |||||||| ||| || || Sbjct 210263 ATTTCCGGTGGAGTGGCTAAATGTATTGAGATC-GAAGAGAACACCAACGGCAAAAGCAC 210321 Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 |||||| | | ||| |||||||| || |||| | |||||||| ||||||| | Sbjct 210322 TCTGCTGGGCCGACACTAACACTGAGAGACGTAAGCTAGAGGAGCAAATGAGATTAGAGA 210381 Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTG 347 ||| ||||||| ||||||||||||| |||||||||| Sbjct 210382 CCCCAGTAGTCCTAGCCGTAAACGATGTATACTAGGTG 210419 >seq205 Length=265618 Score = 82.4 bits (90), Expect = 2e-13 Identities = 97/130 (75%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 218 GATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGC 277 || ||| | | |||| ||| |||||| || |||||| | | |||||||||||| Sbjct 219918 GAGATTGGAAAGAACCCCAACGGCGAAAGCAATCTGCTGGGCCGACACTGACACTGAGAG 219859 Query 278 TCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 |||||| |||||||||| ||| |||| |||| ||||| | |||||||| |||| Sbjct 219858 ATGAAAGCTAGGGGAGCAAATGGGACTAGAGACCC-AGTAGTGCTAGCCGTAAATGATGG 219800 Query 338 ATACTAGGTG 347 |||||||||| Sbjct 219799 ATACTAGGTG 219790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203036256512