Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq6884 655 0.0 seq853 563 3e-158 >seq6884 Length=15222 Score = 655 bits (726), Expect = 0.0 Identities = 468/533 (88%), Gaps = 6/533 (1%) Strand=Plus/Plus Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65 ||||||| || ||| |||||||||| |||| |||| | || |||||||||||||||| Sbjct 10296 TCTTTTGTTCCACACGAGATTTCTGCTCTCGTTGAGCTCATCTGAGGACACCTGCGTTAT 10355 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125 |||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 10356 ATTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGTCCGGAT 10415 Query 126 CGGCCCGCGAAG--GACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTCA 182 |||| || ||| | |||| |||| || || || || | | | ||||| | | Sbjct 10416 CGGCACGGCAAGCGGGCCTTGGAGCCAAAAGGAGG--GGCGATGCCTCGCTTCCGACTAA 10473 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||||||||| |||| ||| |||||||||||||||||||||| || ||||| || Sbjct 10474 CGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCCCAA-GGCTCTCA 10532 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 10533 CTTATCCTACACCTTTCAAGTCATTTCACAAAGTCAGACTAGAGTCAAGCTCAACAGGGT 10592 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 |||||||| | ||||||| |||||||||| |||||||||||||||||||||| ||||||| Sbjct 10593 CTTCTTTCTCTGCTGATTTCGCCAAGCCCATTCCCTTGGCTGTGGTTTCGCTGGATAGTA 10652 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 10653 GACAGGGACAGTGGGAATCTCGTTAATCTATTCATGCGCGTCACTAATTAGATGACGAGG 10712 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 10713 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCTCTTGGTTGAAT 10772 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 10773 TTCTTCGCTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAGCATC 10825 >seq853 Length=150616 Score = 563 bits (624), Expect = 3e-158 Identities = 447/531 (84%), Gaps = 7/531 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| | ||| ||||||||||||||| |||| | |||||||||||||||||| Sbjct 89276 CTTTTGTTACACACGAGATTTCTGTTCTCGTTGAGCTCATGTTAGGACACCTGCGTTATC 89335 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||| ||||| |||||| ||||||||||||||||||| |||||| || || |||| Sbjct 89336 TTTTAATAGATGAACCGCCC-AGCCAAACTCCCCACCTGATAATGTCTTCCGCCTGGATA 89394 Query 127 GGCCCGCGAAGGA-CCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTCATT 184 | | || | || |||| |||| || || ||| || | || | ||||| | | | Sbjct 89395 GCACGGCAAGCGAGCCTTGGAGCCAAAA---GGACGGCGATGCCCCGCTTCCGACTAACT 89451 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 || ||||||||| |||| ||| |||||||||||||||||||||| | |||||||||| Sbjct 89452 GAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCCGTA-GGCTCCCACT 89510 Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 ||| | |||||| |||||||||||| |||| || ||||| |||||||||||||||||||| Sbjct 89511 TATCCGACACCTGTCAAGTCATTTCGCAAAATCAGACTAAAGTCAAGCTCAACAGGGTCT 89570 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 ||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| Sbjct 89571 GCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTTCCTGGATTGTAGA 89630 Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| || Sbjct 89631 AAGGGACAGTGGGAATCTCATTATTCCATTCATGCGCGTCACTAATGAGATGACGAGACA 89690 Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484 |||||||||||||||||||||||| ||||| | || ||||| ||||||||||||||||| Sbjct 89691 TTTGGCTACCTTAAGAGAGTCATAATTACTTCTGCTATTTACTCGCGCTTGGTTGAATTT 89750 Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||| | ||| ||||||||| ||| |||| Sbjct 89751 CTTCACTTTGACATTCAGAGCACTGGACTGAAGTCACATTGCATCAGCATC 89801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634977465632