Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1900 122 3e-25 seq4914 114 4e-23 >seq1900 Length=91562 Score = 122 bits (134), Expect = 3e-25 Identities = 156/211 (74%), Gaps = 8/211 (4%) Strand=Plus/Minus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | ||||||| | || |||||||||| ||||||| ||||| Sbjct 65044 ATTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCG 64986 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 | ||||| |||||||||||||| ||||||||| || ||||||||||| | |||||| | Sbjct 64985 GGACTTATCCGACAAGGAATTTTGCTACCTTAAGACCGTTATAGTTACGGCTGCCGTTCA 64926 Query 470 CTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCT 529 | | ||||||| | | || || | | || | | |||| | |||| |||| Sbjct 64925 CCGAGGCTTCAGTCGTCGGCTTC-CCTATCA-----TCAGTTCACCAACTTTCTTGACCT 64872 Query 530 TCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 ||||||| ||||||||||||| || |||| Sbjct 64871 TCCAGCATTGGGCAGGCGTCAGCCCCCATAC 64841 Score = 84.2 bits (92), Expect = 7e-14 Identities = 105/140 (75%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 8 GTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGCCAACCAG 66 || ||||| |||||||||||||||| || || ||||| | ||| || || | | Sbjct 65330 GTGAGTCTTGCAGTCAAGCTCCCTTCCGCCTTTGCACTCGAGGACCA-ATGTCCGTCTGG 65272 Query 67 GCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAAC 126 | |||| |||||||| |||||||||||| |||||||||||| | ||||||| |||| Sbjct 65271 CCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGGCTA-CGCCCCATAGAAAC 65213 Query 127 TACCCACCAGGCACTGTCCC 146 || | ||| | ||| |||| Sbjct 65212 TATCTACCTGAGACTATCCC 65193 >seq4914 Length=31598 Score = 114 bits (126), Expect = 4e-23 Identities = 105/130 (81%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | ||||||| | || | |||||||| ||| ||| ||||| Sbjct 99 ATTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATTGTTACGCCTTTCTTGCGGGTCG 157 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 |||||||||||||||||||||||||||||||| || ||||||||||| || | ||| | Sbjct 158 GAACTTACCCGACAAGGAATTTCGCTACCTTAAGACCGTTATAGTTACGGCCACGGTTCA 217 Query 470 CTGGGGCTTC 479 | |||||||| Sbjct 218 CCGGGGCTTC 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702168320384