Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15]
13,609 sequences; 563,438,595 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq1900 122 3e-25
seq4914 114 4e-23
>seq1900
Length=91562
Score = 122 bits (134), Expect = 3e-25
Identities = 156/211 (74%), Gaps = 8/211 (4%)
Strand=Plus/Minus
Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409
||||||||| |||| | ||||||| | || |||||||||| ||||||| |||||
Sbjct 65044 ATTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCG 64986
Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469
| ||||| |||||||||||||| ||||||||| || ||||||||||| | |||||| |
Sbjct 64985 GGACTTATCCGACAAGGAATTTTGCTACCTTAAGACCGTTATAGTTACGGCTGCCGTTCA 64926
Query 470 CTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCT 529
| | ||||||| | | || || | | || | | |||| | |||| ||||
Sbjct 64925 CCGAGGCTTCAGTCGTCGGCTTC-CCTATCA-----TCAGTTCACCAACTTTCTTGACCT 64872
Query 530 TCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
||||||| ||||||||||||| || ||||
Sbjct 64871 TCCAGCATTGGGCAGGCGTCAGCCCCCATAC 64841
Score = 84.2 bits (92), Expect = 7e-14
Identities = 105/140 (75%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 8 GTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGCCAACCAG 66
|| ||||| |||||||||||||||| || || ||||| | ||| || || | |
Sbjct 65330 GTGAGTCTTGCAGTCAAGCTCCCTTCCGCCTTTGCACTCGAGGACCA-ATGTCCGTCTGG 65272
Query 67 GCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAAC 126
| |||| |||||||| |||||||||||| |||||||||||| | ||||||| ||||
Sbjct 65271 CCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGGCTA-CGCCCCATAGAAAC 65213
Query 127 TACCCACCAGGCACTGTCCC 146
|| | ||| | ||| ||||
Sbjct 65212 TATCTACCTGAGACTATCCC 65193
>seq4914
Length=31598
Score = 114 bits (126), Expect = 4e-23
Identities = 105/130 (81%), Gaps = 2/130 (2%)
Strand=Plus/Plus
Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409
||||||||| |||| | ||||||| | || | |||||||| ||| ||| |||||
Sbjct 99 ATTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATTGTTACGCCTTTCTTGCGGGTCG 157
Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469
|||||||||||||||||||||||||||||||| || ||||||||||| || | ||| |
Sbjct 158 GAACTTACCCGACAAGGAATTTCGCTACCTTAAGACCGTTATAGTTACGGCCACGGTTCA 217
Query 470 CTGGGGCTTC 479
| ||||||||
Sbjct 218 CCGGGGCTTC 227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702168320384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |