Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq6587 260 4e-67 >seq6587 Length=17116 Score = 260 bits (288), Expect = 4e-67 Identities = 232/283 (82%), Gaps = 12/283 (4%) Strand=Plus/Plus Query 231 ATCGCCGGCTCAAGG-CCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGA 289 ||||||||| ||||| |||||| || || ||||||| |||||||| | ||| | ||| Sbjct 10851 ATCGCCGGCACAAGGGCCATGCAATCTGTCAAGTTATCATGAATCATC--GGATCAGCGA 10908 Query 290 ----AGG--GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTT 342 || |||| | ||||||||||||||| | ||||| || |||||| |||||| Sbjct 10909 GCAGAGCCCGCGTCAGCCTTTTATCTAATAAATGCGCCCCTCCCAGAAGTCAGGGTTTGC 10968 Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAA 402 ||| ||||||||||||||||||| ||||||||||| |||| | | ||| |||||| ||| Sbjct 10969 TGCACGTATTAGCTCTAGAATTACTACGGTTATCCAAGTAGCACG-TACCATCAAACAAA 11027 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGAC 461 | |||||||||||||||||||||||| |||||||| || | ||| || |||||| || Sbjct 11028 CTATAACTGATTTAATGAGCCATTCGTAGTTTCACAGTTTGAATTAGTTCATACTTGCAC 11087 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 11088 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 11130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510194449664