Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1718 86.0 3e-11 seq359 86.0 3e-11 >seq1718 Length=96682 Score = 86.0 bits (94), Expect = 3e-11 Identities = 92/120 (77%), Gaps = 5/120 (4%) Strand=Plus/Plus Query 222424 GCGGCCCTCGGCGTGGCCTACCTCCAC----TCGCGCACCCCGTCCATCATCCACCGCGA 222479 || || | ||| |||||||||||||| |||| |||| | ||||||||||||| || Sbjct 24239 GCAGCGCGCGGGCTGGCCTACCTCCACGAACTCGCCGACCC-GCCCATCATCCACCGGGA 24297 Query 222480 CCTCAAGTCCAGCAACCTGCTCGTGGGCGACTCCCTGTCGATGAAGGTGGCCGACTTTGG 222539 | |||||||||||||| | ||| ||| |||| ||| || ||||| |||||||| || Sbjct 24298 CGTCAAGTCCAGCAACATCCTCATGGACGACCACCTCACGGCCAAGGTCGCCGACTTCGG 24357 >seq359 Length=217556 Score = 86.0 bits (94), Expect = 3e-11 Identities = 92/120 (77%), Gaps = 5/120 (4%) Strand=Plus/Minus Query 222424 GCGGCCCTCGGCGTGGCCTACCTCCAC----TCGCGCACCCCGTCCATCATCCACCGCGA 222479 || || | ||| |||||||||||||| |||| |||| | ||||||||||||| || Sbjct 63846 GCAGCGCGCGGGCTGGCCTACCTCCACGAACTCGCCGACCC-GCCCATCATCCACCGGGA 63788 Query 222480 CCTCAAGTCCAGCAACCTGCTCGTGGGCGACTCCCTGTCGATGAAGGTGGCCGACTTTGG 222539 | |||||||||||||| | ||| ||| |||| ||| || ||||| |||||||| || Sbjct 63787 CGTCAAGTCCAGCAACATCCTCATGGACGACCACCTCACGGCCAAGGTCGCCGACTTCGG 63728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084366827792982