Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq5477 181 2e-43 seq5212 95.1 2e-17 >seq5477 Length=8221 Score = 181 bits (200), Expect = 2e-43 Identities = 176/222 (79%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||| ||| Sbjct 4783 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAA-TTC 4840 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 |||||| ||| ||||||| || ||||||| ||||||| ||| ||||| | || Sbjct 4841 CTCGTTCAAGGGGAACAATTACAGGCCCCTATCCCAATCACGAAGAAGGTTCAATGGGTT 4900 Query 120 ACCCGGACCTGTCGGCCAAGG----TGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 ||| | || | | ||| | | | | || ||| || ||||||||||||||| Sbjct 4901 TCCCACTCTTGACAGAGTAGGCTTATAACAAGCACGCTGATCACTTCAGTGTAGCGCGCG 4960 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||| | ||||||||||||||||||||||||||||||| Sbjct 4961 TGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 5002 >seq5212 Length=9800 Score = 95.1 bits (104), Expect = 2e-17 Identities = 85/103 (83%), Gaps = 3/103 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||||| |||||| ||||||||||| |||| ||| Sbjct 5128 GTACAAAGGGCAGGGACGTAATCAGCGCGA-TATGATGAATCGCGCTTACTGGGAA-TTC 5185 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCC-CATCACG 102 |||||| | | ||||||||||||| | ||||| |||||| Sbjct 5186 CTCGTTCATGGGCAACAATTGCAATCCCCAATCCCAAATCACG 5228 Score = 89.7 bits (98), Expect = 8e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 || |||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct 5382 CATTGTAGCACGCGTGCGGCCTAGAATATCTAAGGGCATCACAGACCTGTTATTGCCTC 5440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751916747020