Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq296 113 1e-22 seq512 78.8 2e-12 >seq296 Length=208948 Score = 113 bits (124), Expect = 1e-22 Identities = 162/224 (72%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | ||| ||| ||||||||| | || || | | ||||||||| |||||| || Sbjct 115752 GGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGCGAAAGC 115693 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | | || || | || ||||| || | |||||||| |||||||||| |||||||| Sbjct 115692 ACTCTGCTAGGCTGACCCTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATTAGA 115633 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTT-ACTTCCTT 367 |||| ||||||| ||| |||||||| ||||| || || | || | || || | Sbjct 115632 AACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGCTGTGCGACTCGAC--CCGT 115575 Query 368 G--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || ||||||||||||| |||| | ||||||||| ||| Sbjct 115574 GCAGTGCTGTAGCTAACGCGTTAAGTATCCTGCCTGGGGAGTAC 115531 >seq512 Length=161502 Score = 78.8 bits (86), Expect = 2e-12 Identities = 130/183 (71%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 231 GAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTG 290 |||| |||| ||||| ||| | ||||| |||||||| || | |||||||| | Sbjct 151835 GAACCCCAACAGCGAAAGCAATCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAG 151776 Query 291 GGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGT 350 ||||||||| ||| || | |||| ||||| | ||| ||||||||| ||||| || Sbjct 151775 GGGAGCAAATGGGACTACAGACCCCAGTAGTGCTAGCCGTAAACGATAGATACTAGGTGC 151716 Query 351 TGGG-GATTT-ACTTCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAA 406 || | || | || || || || ||||||||||||| |||| || |||| |||| Sbjct 151715 TGTGCGACTCGAC--CCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCACCTGAGGAA 151658 Query 407 TAC 409 ||| Sbjct 151657 TAC 151655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289452624512