Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq484 87.8 2e-15 >seq484 Length=164630 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||||||||||||| || || |||| || | | ||| || Sbjct 44490 TAAGGAACTCGGCAAAATAGCCCTGTAACTTCGAGAGAAGGGGTGCCCCCTCGCAAAAGG 44549 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 44550 G-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 44598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531141191512