Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq5477 91.5 9e-17 seq5212 82.4 5e-14 >seq5477 Length=8221 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 4734 TCCGAA-GACCTCACTAAAACATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 4790 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 4791 GGCAGGGACGTAAT-CAACGCGAGCT 4815 >seq5212 Length=9800 Score = 82.4 bits (90), Expect = 5e-14 Identities = 58/64 (91%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| | ||||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 5088 CTCACTAAAAC-TTTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 5145 Query 109 TAAT 112 |||| Sbjct 5146 TAAT 5149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300767773040