Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq5477 118 1e-24 >seq5477 Length=8221 Score = 118 bits (130), Expect = 1e-24 Identities = 137/182 (75%), Gaps = 7/182 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT----GCTCGAATACATTA 65 || ||||||||||||||||||||| | ||||||||||| ||| || |||||| | Sbjct 5687 ACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCTTTTACAAGCCCGAATAATGTT 5628 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC--CG 123 ||||||||||| ||||||||| | |||||||||||||| ||| | | | | || | Sbjct 5627 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTCTTCGGAATCTCCGAGG 5569 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| || | ||| || |||||| | ||||| | | |||||||||||||| Sbjct 5568 TAATGATTAAGAGGGACAGACGGGGGCATTCGTATTGCGACGCTAGAGGTGAAATTCTTG 5509 Query 184 GA 185 || Sbjct 5508 GA 5507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511943317120