Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq296 138 3e-30 seq36 116 9e-24 seq512 89.7 1e-15 >seq296 Length=208948 Score = 138 bits (152), Expect = 3e-30 Identities = 169/227 (74%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 183 CAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCG 242 |||| |||||| | ||| ||||||||||||| | || || | | |||||||| |||| Sbjct 115756 CAAG-GGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGCG 115698 Query 243 AAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGA 302 || || |||| | ||| ||||||||||| ||||||| |||||||||| ||| Sbjct 115697 AAAGCACTCTGCTAGGCTGACCCTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGA 115638 Query 303 TTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCG-CATAAG 361 ||||| |||| ||||||| ||||||||||||| |||||||||| | | ||| | | Sbjct 115637 TTAGAAACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTG-CTGTGCGACTCGAC 115579 Query 362 TGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | |||| | ||| ||||| ||||||| | ||||||||||| Sbjct 115578 CCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCTGCCTGGGGAGTA 115532 >seq36 Length=476501 Score = 116 bits (128), Expect = 9e-24 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131 GGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGA 190 |||||||||| || || | |||||| | ||| |||||| | || |||| ||| Sbjct 34068 GGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTGCGGTAGTGGCAGAGGGA 34127 Query 191 ATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGC 250 ||| | ||| || || ||||||| | || || | | |||||||| |||||| || Sbjct 34128 ATTTCCGGTGGAGTGGCGAAATGCATTGAGATCGGAAAGAACACCAACGGCGAAAGCACT 34187 Query 251 TTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATAC 310 |||||| | | ||| |||||||| || |||| |||||||||| ||||||| || Sbjct 34188 CTGCTGGGCCGACACTAACACTGAGAGACGTAAGCTAGGGGAGCAAATGAGATTAGAGAC 34247 Query 311 CCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTG 347 | |||||| ||||||||||||| |||||||||| Sbjct 34248 CTAAGTAGTCTTAGCCGTAAACGATGGATACTAGGTG 34284 >seq512 Length=161502 Score = 89.7 bits (98), Expect = 1e-15 Identities = 130/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 229 GAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTG 288 |||| ||| ||||| || |||||| | | |||||||||||| ||||||| | Sbjct 151835 GAACCCCAACAGCGAAAGCAATCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAG 151776 Query 289 GGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGT 348 ||||||||| ||| || | |||| ||||| | |||||||||||| |||||||||| Sbjct 151775 GGGAGCAAATGGGACTACAGACCCCAGTAGTGCTAGCCGTAAACGATAGATACTAGGTG- 151717 Query 349 CGGGGCG-CATAAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGT 407 | | ||| | | | | |||| | ||| ||||| ||||||| ||||||| ||| | Sbjct 151716 CTGTGCGACTCGACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCACCTGAGGAAT 151657 Query 408 A 408 | Sbjct 151656 A 151656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203062498304