Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5477 159 7e-37 seq5212 98.7 2e-18 >seq5477 Length=8221 Score = 159 bits (176), Expect = 7e-37 Identities = 169/220 (77%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || Sbjct 5002 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGA-AG 4944 Query 174 AGC-CAACGAGTTCATCA----CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG 228 | || || | | | | ||| | | | | |||| || | | || || Sbjct 4943 TGATCAGCGTGCTTGTTATAAGCCTACTCTGTCAAGAGTGGGAAACCCATTGAACCTTCT 4884 Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||| | ||||||| | || |||| || | ||| |||||||||| || ||||||||| Sbjct 4883 TCGTGATTGGGATAGGGGCCTGTAATTGTTCCCCTTGAACGAGGAATTCCCAGTAAGCGC 4824 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| ||| |||||||||||||||||||||||||||| Sbjct 4823 GAGTCATAAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 4784 >seq5212 Length=9800 Score = 98.7 bits (108), Expect = 2e-18 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 237 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296 ||||| | | ||||||||| |||| | | |||||||||| || |||||||||| ||||| Sbjct 5220 GGGATTGGGGATTGCAATTGTTGCCCATGAACGAGGAATTCCCAGTAAGCGCGATTCATC 5161 Query 297 AGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | |||| ||||||||||||||||||||||| Sbjct 5160 ATATCGCGCTGATTACGTCCCTGCCCTTTGTA 5129 Score = 89.7 bits (98), Expect = 1e-15 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 111 GAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| || Sbjct 5440 GAGGCAATAACAGGTCTGTGATGCCCTTAGATATTCTAGGCCGCACGCGTGCTACAATG 5382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947091753984