Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq5844 82.4 3e-13 >seq5844 Length=6454 Score = 82.4 bits (90), Expect = 3e-13 Identities = 107/143 (75%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 ||| |||| ||| || | |||||||||| | |||||||||||||||| |||||||| | Sbjct 206 AGCCAGGAGGTTTGCCTAGAAGCAGCCACCC-TTTAAAGAGTGCGTAATAGCTCACTGAT 148 Query 477 CGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCA 536 |||| | ||| || || | |||| |||| ||| ||||||| ||||||| Sbjct 147 CGAGCGCCCTTGCGCTGAAGATGAACGGG-GCTAAGCGATCTGCCGAAGCTGTGGGAT-G 90 Query 537 TTTATATG-ATCGGTAGGGGAGC 558 || | ||| |||||||||||||| Sbjct 89 TTAAAATGCATCGGTAGGGGAGC 67 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689406912512