Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq30 672 0.0 seq5477 513 4e-143 seq5212 401 2e-109 >seq30 Length=495629 Score = 672 bits (744), Expect = 0.0 Identities = 471/532 (89%), Gaps = 6/532 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | || |||||||||||||||| Sbjct 144911 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTGAGGACACCTGCGTTATA 144852 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 144851 TTTTAATAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCTGTCCGGATC 144792 Query 127 GGCCCGCGAAG--GACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTCAT 183 ||| || ||| | |||| |||| || || || || | | | ||||| | | Sbjct 144791 GGCACGGCAAGCGGGCCTTGGAGCCAAAAGGAGG--GGCGATGCCTCGCTTCCGACTAAC 144734 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 || ||||||||| |||| ||| |||||||||||||||||||||| || ||||||||| Sbjct 144733 GGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCCCAA-GGCTCCCAC 144675 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 144674 TTATCCTACACCTTTCAAGTCATTTCACAAAGTCAGACTAGAGTCAAGCTCAACAGGGTC 144615 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct 144614 TTCTTTCCCTGCTGATTCCGCCAAGCCCATTCCCTTGGCTGTGGTTTCGCTGGATAGTAG 144555 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 144554 ACAGGGACAGTGGGAATCTCGTTAATCTATTCATGCGCGTCACTAATTAGATGACGAGGC 144495 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 144494 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCTCTTGGTTGAATT 144435 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 144434 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAGCATC 144383 >seq5477 Length=8221 Score = 513 bits (568), Expect = 4e-143 Identities = 458/573 (80%), Gaps = 53/573 (9%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||||||||||||||| |||| ||||||||||||||||||| Sbjct 293 CTTTTGCTCTACGTGAGATTTCTGTTCTCACTGAGCTAGCCTTAGGACACCTGCGTTACC 352 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| ||||| | |||| || ||||| Sbjct 353 TTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGAAACTGTCCTCGGAGGGGATC 412 Query 127 GGCCCGCG-AAGGACCTTAACGCCAG---------AAAATGG---TCGG---------TG 164 | ||| | || || ||||| | |||| | ||| | Sbjct 413 GTGCCGAGCAAACAC----ACGCCTGCCCGAAGACAAAACGTGCCTCGAACACTTGATTC 468 Query 165 AAGA---------CCA------GTTCCGCTT--CATT-----GATTAAGTaaaaaaaCGA 202 |||| ||| |||||||| || | || | |||||| |||| | Sbjct 469 AAGAAACGTGGAACCACAATGTGTTCCGCTCTCCACTTAACCGAGTCAGTAAAGAAACTA 528 Query 203 TAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG--CTCCCACTTATTCTACACCTCTCA 260 | | ||||||||||||||| || |||| | ||||||||||| ||||||| | || Sbjct 529 TGGGCGTAGTGGTATTTCAC---CGGCGAATTGCTTCTCCCACTTATGCTACACCGCCCA 585 Query 261 AGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATT 320 ||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 586 TGTCTCTTCACAGAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATT 645 Query 321 CCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAAT 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 646 TTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAAT 705 Query 381 CTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 440 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 706 CTCGTTGATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 765 Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 766 GAGTCATAGTTACTCCCGCCGTTTAGTAGCGCTTGGTTGAATTTCTTCACTTTGACATTC 825 Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | | ||||||||||||||||||||||||||||| Sbjct 826 ATACCACTGGGCAGAAATCACATTGCGTCAACA 858 >seq5212 Length=9800 Score = 401 bits (444), Expect = 2e-109 Identities = 317/378 (84%), Gaps = 19/378 (5%) Strand=Plus/Plus Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG---------CC 229 || || || | |||||| ||||||| | ||||| |||||||||| ||| || Sbjct 637 TTAATCGAGTCAGTAAAGAAACGATGAAGGTAGAGGTATTTCACCGGCGACTACGAACCC 696 Query 230 GAA---ACGG---CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTA 283 ||| ||| ||||| ||||||||||||| |||| ||| ||||||| ||| || || Sbjct 697 GAAGGAACGCAATCTCCCTCTTATTCTACACCCCTCATGTCTCTTCACAATGTCAGATTA 756 Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 757 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCT 816 Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 817 GTGGTTTCGCTAGGTAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 876 Query 404 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 463 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 877 CACTAATTAGATGACGAGGCATTTGGCTACCAGAAGAGAGTCATAGTTACTCCCGCCGTT 936 Query 464 TACCCGCGCTT--GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 ||| |||||| ||| || || | | ||||||| ||||||||||||||||||| Sbjct 937 TACTTGCGCTTACGGT--CATCTCAAACCGATAACATTCAAAGCACTGGGCAGAAATCAC 994 Query 522 ATTGCGTCAACATCACTT 539 | ||||||| || || Sbjct 995 AAGCTGTCAACACCAGTT 1012 Score = 118 bits (130), Expect = 3e-24 Identities = 92/110 (84%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 298 CTTTTACTCTACGAGAGGTTTCTGTCCTCTCTGAGCTAACCTTAGGACACCTGCGTTATT 357 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATC 116 |||||||||||| ||||||||| |||||||||| ||||||| |||| || Sbjct 358 CTTTAACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACACTGTCCTC 407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635013129344