Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amborella_20trichopoda_20[refseq_20GCF_5F000471905.2_202013-09-30] 5,746 sequences; 706,495,326 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1810 513 3e-143 seq4452 223 6e-56 seq2686 223 6e-56 seq571 221 2e-55 seq3199 219 8e-55 seq361 215 9e-54 seq1552 197 3e-48 seq1 181 2e-43 seq2962 125 1e-26 >seq1810 Length=2008 Score = 513 bits (568), Expect = 3e-143 Identities = 302/314 (96%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||| Sbjct 1327 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAACCTCATGCCCTTCACTGGGTGTGCTGGGGA 1268 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1267 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 1208 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1207 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 1148 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 1147 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATCGTCAGAGGTGAAATTCTTGG 1088 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 1087 ATTGATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 1028 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 1027 ACGAAAGTTAGGGG 1014 >seq4452 Length=3630538 Score = 223 bits (246), Expect = 6e-56 Identities = 201/246 (82%), Gaps = 5/246 (2%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| |||| |||| |||||||||||||||| Sbjct 3434873 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTAAGCTCTGAATACATTAGCATGGG 3434932 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT-TTCTAGGACCGCCGTAATGATTA 192 |||| | | |||| | |||| ||||| |||||| ||| || | || |||||||||| Sbjct 3434933 ATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGAG-ATCGGAGTAATGATTA 3434990 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 | ||||| ||||||||| | |||||| || ||||||||||||||||||||||||| Sbjct 3434991 AGAGGGACAGTCGGGGGCATTAGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTACGA 3435050 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||| ||||| ||||| || ||||||||||||||||||||| ||| |||||| Sbjct 3435051 AAGACGAACCACTGCAAAAGCATTTGTCAAGGATGTTTTCATTAATCA-AGAAAGAAAGT 3435109 Query 313 TAGGGG 318 | |||| Sbjct 3435110 TGGGGG 3435115 Score = 179 bits (198), Expect = 7e-43 Identities = 192/250 (77%), Gaps = 8/250 (3%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA-TACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| |||| ||||| || |||||||||||| Sbjct 3410927 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTAAATACATTAGCATGAG 3410868 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | || || ||||||||||| Sbjct 3410867 ATAACATCATAGGATTT-CGGTCCTATTGTGTTGGGCTTCGTGATCGGAGTAATGATTAA 3410809 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAA-----ATTCTTGGATTT 248 ||||| || | |||| | ||||| || |||| ||||||| | |||||||| Sbjct 3410808 GAGGGACAGACAGGGGCATTCGTATTTCATAGTCAAAGGTGAAGAGGGACAGTTGGATTT 3410749 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 || ||||| ||| ||| ||||||| | |||||||||||| ||||||||| |||||| Sbjct 3410748 ATGAAAGACGAACCACTACGAAAGCAATTGCCAAGGATGTTTACATTAATCA-AGAACGA 3410690 Query 309 AAGTTAGGGG 318 ||||| |||| Sbjct 3410689 AAGTTGGGGG 3410680 >seq2686 Length=2812123 Score = 223 bits (246), Expect = 6e-56 Identities = 201/246 (82%), Gaps = 5/246 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| |||| ||| |||||||||||||||| Sbjct 33018 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTATGAATACATTAGCATGGG 32959 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT-TTCTAGGACCGCCGTAATGATTA 192 | || | | |||| | |||| ||||| |||||| ||| || | || |||||||||| Sbjct 32958 AAAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGAG-ATCGGAGTAATGATTA 32901 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 | ||||| ||| ||||| | ||||| || |||||||||||||||||||||||||| Sbjct 32900 AGAGGGACAGTTGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGA 32841 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||||||||||||||| || | |||||||||||||||||||| |||||||||| Sbjct 32840 AAGACGAACTACTGCGAAAGCATTTTCGAAGGATGTTTTCATTAATCA-AGAACGAAAGT 32782 Query 313 TAGGGG 318 | |||| Sbjct 32781 TGGGGG 32776 Score = 214 bits (236), Expect = 3e-53 Identities = 199/249 (80%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA-TACATTAGCA 129 || ||||||||||| ||||||||||| |||||||| |||| ||||| || |||||||||| Sbjct 535 ACCTTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTAAATACATTAGCA 476 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||| |||| | | | || | | || ||||| |||||| | | ||| | ||||||| Sbjct 475 TGGGATAACATCACATGATTT-CTGTCCTATTCTGTTGGCCTTTGGGATCAGAGTAATGA 417 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||| ||||| ||||||||| | ||||| ||||||| |||||||||||||||||||| Sbjct 416 TTAAGAGGGACAGTCGGGGGCATTCGTATTTCATTGTCAAAGGTGAAATTCTTGGATTTA 357 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 | ||||| ||| |||||||||| | |||||||||||||||||||||| ||| || Sbjct 356 TGAAAGACGAACCACTGCGAAAGAATCTGCCAAGGATGTTTTCATTAATCA-AGAATCAA 298 Query 310 AGTTAGGGG 318 |||| |||| Sbjct 297 AGTTGGGGG 289 Score = 210 bits (232), Expect = 4e-52 Identities = 198/246 (80%), Gaps = 5/246 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| ||||| || |||| |||| |||||||||||||||| Sbjct 12240 TTACTTTGAAGAAATTAGAGTGCTCAAAACAAGCCTACGCTCTGAATACATTAGCATGGG 12181 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT-TTCTAGGACCGCCGTAATGATTA 192 |||| | | |||| | |||| ||||| |||||| ||| || | || ||||||||| Sbjct 12180 ATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGAG-ATCGGATTAATGATTA 12123 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 | ||||| ||||||||| | ||||| || |||||||||||||||||| ||||||| Sbjct 12122 AGAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTTGATTTATGA 12063 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||| ||||||||||| | ||||| |||||||||||||||| ||||||||| Sbjct 12062 AAGACCAACCACTGCGAAAGCACTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGG 12004 Query 313 TAGGGG 318 | |||| Sbjct 12003 TGGGGG 11998 Score = 187 bits (206), Expect = 5e-45 Identities = 192/246 (78%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| |||| |||| |||||||||||||||| Sbjct 14690 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGAATACATTAGCATGGG 14631 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | | | | | | || ||||| |||||| | | ||| || ||||||||||| Sbjct 14630 ATAACATCACAATATTT-CAGTCCTATTGTGTTGGCCTTTGGGATCGGAGTAATGATTAA 14572 Query 194 TAGGGATAGTCGGGGGTG-TCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||| ||||||||| | |||| || || |||||||| |||||||||||||| Sbjct 14571 GAGGGACAGTCGGGGGACATTCGTATGTCATAGTTAGAGGTGACATTCTTGGATTTATGA 14512 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||| | ||| ||| ||||||| || |||| |||||||| ||||||| |||||||||| Sbjct 14511 AAGTCGAACCACTACGAAAGCATTTGCCAACAATGTTTTCCTTAATCA-AGAACGAAAGT 14453 Query 313 TAGGGG 318 | |||| Sbjct 14452 TGGGGG 14447 >seq571 Length=440730 Score = 221 bits (244), Expect = 2e-55 Identities = 206/255 (81%), Gaps = 5/255 (2%) Strand=Plus/Plus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACAT 124 |||| || |||||||||| ||||||||||| |||||||| |||| ||| |||||||| Sbjct 363888 CCAGCACCATTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACACTCCGAATACAT 363947 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT-TTCTAGGACCGCCG 183 |||||||| |||| | | | || || ||| ||||| |||||| ||| || | || | Sbjct 363948 TAGCATGGGATAACAACACAAGA-GTTTGGTCCTATTGTGTTGGCCTTCGAG-ATCGGAG 364005 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||| ||||||||| ||||| | |||| || ||||||||||||||||||| Sbjct 364006 TAATGATTAAGAGGGATAGTTGGGGGCATTCTTATTTCATAGTCAGAGGTGAAATTCTTG 364065 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||||||| ||||| ||| ||||||||||| || ||||||||||||||||||||| | Sbjct 364066 GATTTATGAAAGACGAACCACTGCGAAAGCATTTGTCAAGGATGTTTTCATTAATCA-AG 364124 Query 304 AACGAAAGTTAGGGG 318 |||||||||| |||| Sbjct 364125 AACGAAAGTTGGGGG 364139 Score = 183 bits (202), Expect = 6e-44 Identities = 211/280 (75%), Gaps = 3/280 (1%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 || |||| ||||| | |||| | || | || ||||||||||||||||||||| ||| Sbjct 341466 TGGCCTTAACTGGCCGGGCCGTGCCTCCGGCACCGTTACTTTGAAAAAATTAGAGTATTC 341525 Query 100 AAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||| | |||| |||| |||||| ||||||||| |||| | | | || | |||||| Sbjct 341526 AAAGAAAGCCTACGCTCTGAATACGTTAGCATGGGATAACATCACAAGATTT-CGGTTCC 341584 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 ||| ||||| | || | | ||||||||||| | || |||||||| | |||| Sbjct 341585 ATTGTGTTGACCTTCAGAATCAAAGTAATGATTAAGACGGGCAGTCGGGGTCATTTGTAT 341644 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278 | || || ||||||||||||||||||||||| || || ||| | ||| ||||| || Sbjct 341645 TTCATAGTAAGAGGTGAAATTCTTGGATTTATGAAACACGAACCATTGCAAAAGCATTTG 341704 Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||| ||||||||| ||||||| ||||||||||| |||| Sbjct 341705 CCAATGATGTTTTCGTTAATCA-AGAACGAAAGTTGGGGG 341743 Score = 167 bits (184), Expect = 4e-39 Identities = 187/245 (76%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||| ||||| |||| |||||| |||||||| ||| | || |||||||||||||||| Sbjct 352050 TTACATTGAAGAAATAAGAGTGCTCAAAGCAAGCCGACGATCTGAATACATTAGCATGGG 352109 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | | | || | || |||| ||||| ||| ||| || |||||||| ||| Sbjct 352110 ATAACATCACAAGATTT-CGAGCATATTGTGTTGACTTCG-GGATCGGCGTAATGAATAA 352167 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| ||||||||| | |||| || ||| |||| ||||||||||||||||| | Sbjct 352168 GAGGGACAGTCGGGGGCATTCATATTTCATAGTCCGAGGGGAAATTCTTGGATTTATGAA 352227 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| || | |||||| | | |||||||||||||||||||| ||| ||||||| Sbjct 352228 AGACGAACCACAGTGAAAGCATCTGCTAAGGATGTTTTCATTAATCA-AGAAAGAAAGTT 352286 Query 314 AGGGG 318 |||| Sbjct 352287 GGGGG 352291 >seq3199 Length=2935351 Score = 219 bits (242), Expect = 8e-55 Identities = 198/245 (81%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| |||| ||| ||||||||||| ||| Sbjct 2517366 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACACTCTGAATACATTAGTATGTG 2517307 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||| | | |||| | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 2517306 ATACCATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 2517248 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 2517247 GAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 2517188 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 2517187 AGACGAACCACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 2517129 Query 314 AGGGG 318 |||| Sbjct 2517128 GGGGG 2517124 >seq361 Length=4861392 Score = 215 bits (238), Expect = 9e-54 Identities = 197/245 (80%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 || ||||||| ||||||||||| |||||||| |||| ||| |||||||||||||||| Sbjct 1962931 TTCCTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACCCTCTGAATACATTAGCATGGG 1962990 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | | | || | || | ||||| |||||| | | ||| || ||||||||||| Sbjct 1962991 ATAACATCACAAGATTT-CGATCCTATTGTGTTGGCCTGTGGGATCGGAGTAATGATTAA 1963049 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| ||||||||| | |||||| || |||||||||||||||||| ||||||| | Sbjct 1963050 GAGGGACAGTCGGGGGCATTCGTATTCCATAGTCAGAGGTGAAATTCTTTGATTTATGAA 1963109 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||| |||| || |||||||||||||||||||||| ||||||||||| Sbjct 1963110 AGACGAACCACTGCAAAAGGATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 1963168 Query 314 AGGGG 318 |||| Sbjct 1963169 GGGGG 1963173 Score = 188 bits (208), Expect = 1e-45 Identities = 192/245 (78%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 || ||||||| ||||||||||| |||||||| |||| ||| |||||||||||||||| Sbjct 1987705 TTGCTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTTTGAATACATTAGCATGGG 1987764 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | | | || | | | ||||| |||||| | ||| || || |||||||| Sbjct 1987765 ATAACATCACAAGATTTT-GATCCTATTGTGTTGGCCTTCGGGATCGGAGTTATGATTAA 1987823 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| ||||||||| || ||||| || ||||||||||||||| |||||||||| | Sbjct 1987824 GAGGGACAGTCGGGGGCTTC-GTATTTCATAGTCAGAGGTGAAATTATTGGATTTATGAA 1987882 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||| ||||||| || | ||||||||||||||||||| ||| ||||||| Sbjct 1987883 AGACGAACCACTACGAAAGCATTTTTCGAGGATGTTTTCATTAATCA-CGAATGAAAGTT 1987941 Query 314 AGGGG 318 |||| Sbjct 1987942 GGGGG 1987946 Score = 174 bits (192), Expect = 3e-41 Identities = 195/254 (77%), Gaps = 5/254 (2%) Strand=Plus/Plus Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATT 125 ||| ||| |||||||||| ||||||||||| |||||||| || | ||| |||||| | Sbjct 1975909 CAGCACTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCGTAAGCTTTGAATACCAT 1975968 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT-TTCTAGGACCGCCGT 184 ||||||| |||| | | | || | || | ||||| || | | ||| || | | || Sbjct 1975969 AGCATGGGATAACATCACAAGATTT-CGTTCCTATTGTGGTAGCCTTCGAGATCAGA-GT 1976026 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||| ||||| ||||||||| | ||||| || |||||||||||||||||||| Sbjct 1976027 AATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGG 1976086 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||||| |||| ||| ||||||||||| | |||| | ||||||||||| ||| || Sbjct 1976087 ATTTATGAAAGATGAACCACTGCGAAAGCATCTGCCAATGTTGTTTTCATTACTCA-AGA 1976145 Query 305 ACGAAAGTTAGGGG 318 || |||||| |||| Sbjct 1976146 ACAAAAGTTGGGGG 1976159 >seq1552 Length=8757819 Score = 197 bits (218), Expect = 3e-48 Identities = 198/251 (79%), Gaps = 11/251 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| |||| |||| |||||||||||| || Sbjct 1836891 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGAATACATTAGCCAGGG 1836950 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | | || | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 1836951 ATAACATCACAGAT--TTCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 1837008 Query 194 TAGGGATAGTCGGGGGTGT---CA---GTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 ||||| ||||||||| | || ||||| || |||||||||||||||||||||| Sbjct 1837009 GAGGGACAGTCGGGGGCATGGGCATTCGTATTTCATAATCAGAGGTGAAATTCTTGGATT 1837068 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 ||| ||||| ||| ||||||||||| || ||||||||| |||||||||||| ||||| Sbjct 1837069 TATGAAAGACGAACCACTGCGAAAGCATTTGCCAAGGATG-TTTCATTAATCA-AGAACG 1837126 Query 308 AAAGTTAGGGG 318 |||||| |||| Sbjct 1837127 AAAGTTGGGGG 1837137 >seq1 Length=3733942 Score = 181 bits (200), Expect = 2e-43 Identities = 210/279 (75%), Gaps = 3/279 (1%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 || |||| ||||| | | || | |||| || |||||||||| ||||||||||| || Sbjct 540892 TGACCTTAACTGGTCGGGTCGTGCCTCCAGCACCGTTACTTTGAAGAAATTAGAGTGCTC 540951 Query 100 AAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||| |||| |||| || ||||||||||||| |||| | | | || | ||| || Sbjct 540952 AAAGCAAGCCTACGCTCTGAGTACATTAGCATGGGATAACATCACAAGATTTT-GGTCCT 541010 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 ||| || ||| | ||| | ||||| ||| ||||| |||| |||| | |||| Sbjct 541011 ATTGTGATGGCCTTCGGGATTAGAGCAATGAATAAGAGGGACAGTCTGGGGCATTCGTAT 541070 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278 | ||| || |||||||| |||||||||||||| ||||| ||| ||||||||||| || Sbjct 541071 TTAATAGTTAGAGGTGATATTCTTGGATTTATGAAAGACGAACCACTGCGAAAGCATTTG 541130 Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGG 317 ||||||||||||||||||||| || ||||||| ||| Sbjct 541131 TCAAGGATGTTTTCATTAATCA-AAAATGAAAGTTGGGG 541168 >seq2962 Length=1574043 Score = 125 bits (138), Expect = 1e-26 Identities = 107/131 (82%), Gaps = 1/131 (1%) Strand=Plus/Plus Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||| ||||| |||| | || | ||| | || |||| |||||||||| ||||||| Sbjct 1400271 GATTAAGAGGGACAGTCAGAGGCATTTGTAGTTCATAGTCATAGGTGAAATTTTTGGATT 1400330 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 ||| ||||| ||| ||||||||||| || |||||||||||||||||||||| ||||| Sbjct 1400331 TATGAAAGACGAACCACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACG 1400389 Query 308 AAAGTTAGGGG 318 |||||| |||| Sbjct 1400390 AAAGTTGGGGG 1400400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915147412608