Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amborella_20trichopoda_20[refseq_20GCF_5F000471905.2_202013-09-30] 5,746 sequences; 706,495,326 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq5746 107 2e-21 seq2801 98.7 1e-18 seq3691 93.3 5e-17 seq2922 91.5 2e-16 seq2296 89.7 6e-16 seq11 89.7 6e-16 seq5495 80.6 3e-13 seq2467 80.6 3e-13 seq2301 80.6 3e-13 seq16 80.6 3e-13 seq453 78.8 1e-12 seq18 77.0 4e-12 seq3335 75.2 1e-11 seq653 75.2 1e-11 seq531 73.4 4e-11 >seq5746 Length=162686 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 113635 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 113576 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 113575 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 113517 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 113516 ACAAGGAATTTCGCTACCTTAGGACCGTTA 113487 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 140022 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 140081 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 140082 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 140140 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 140141 ACAAGGAATTTCGCTACCTTAGGACCGTTA 140170 >seq2801 Length=2595379 Score = 98.7 bits (108), Expect = 1e-18 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||||| ||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 678265 GGGTCTTTTTGTCTTGGTGCAGGTAGTCTGCATCTTCACAGACATGTCTATTTCACCGAG 678206 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| ||| ||||||||||| Sbjct 678205 C-CTCTCTCCGAGACAGTGCCCAAATCGGTACGCCTTTCGTGCGAGTCCGAACTTACCCG 678147 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 678146 ACAAGGAATTTCGCTACCTTAGGACCGTTA 678117 >seq3691 Length=2188073 Score = 93.3 bits (102), Expect = 5e-17 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 |||||||| |||| || |||| || ||||||||| || | | ||||||||| | Sbjct 1434597 GGGGTCTTACCGTCTAGCCGTTGGTACTCCACATCTTCACGGAGAATTCAATTTCACCGG 1434656 Query 84 GCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | || | ||||| | |||||||||| ||||||||| ||||| || Sbjct 1434657 GTCCATGTCGGAGACTGCGGGGTAGTCGTTACACCATTCTTGCAGGTCGTTACTTATGCG 1434716 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||| |||| Sbjct 1434717 ACAAGGAATTTCGCTACCTTAGGACAGTTA 1434746 >seq2922 Length=2832988 Score = 91.5 bits (100), Expect = 2e-16 Identities = 107/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||| |||| || |||| || ||||||||| | | | ||||||||||| | Sbjct 302709 GGGTCTTACCGTCTAGCCGTTGGTACTCCACATCTTCACGAAGAATTCAATTTCACTGGG 302650 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 || | ||||||| |||||||||||||||||||| ||||| ||| Sbjct 302649 TCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGA 302590 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||| |||||||||||| |||| Sbjct 302589 CAAGGAATTTTGCTACCTTAGGATAGTTA 302561 >seq2296 Length=5115746 Score = 89.7 bits (98), Expect = 6e-16 Identities = 91/120 (76%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 55 CATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTG-AGACAGNNNNNNNNNNNNT 113 ||||||||| || | | ||||||||| ||| || || | |||||| | Sbjct 3282071 CATCTTCACAGAGAATTCAATTTCAC-GAGGTCCATGTCGGAGACAGCGGGGCAGTCATT 3282129 Query 114 ACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| |||| Sbjct 3282130 ACACCATTCGTGCCGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGACAGTTA 3282189 Score = 84.2 bits (92), Expect = 2e-14 Identities = 93/128 (73%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 46 GGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNN 105 |||| | |||||||||| || | ||||||||| | | || | ||||||| Sbjct 3370272 GGTATTTCGCATCTTCACAGAGATATCAATTTCACAGGGTCCATGTCGGAGACAGAGGGG 3370213 Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165 |||||||||||||| ||||| ||||| ||||||||||||| |||||||||| Sbjct 3370212 CAGTCATTACACCATTCGTGCGGGTCGCTACTTATGCGACAAGGAATTTTGCTACCTTAG 3370153 Query 166 GACCGTTA 173 ||| |||| Sbjct 3370152 GACAGTTA 3370145 >seq11 Length=4280439 Score = 89.7 bits (98), Expect = 6e-16 Identities = 108/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| | |||||||||| || | | ||||||||| | Sbjct 1893302 CGGGGTCTTACCGTCTAGCCGTTGGTACTTCGCATCTTCACGGAGAATTCAATTTCACCG 1893243 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | |||||| | |||||||||||||||||| ||||| | Sbjct 1893242 GGTCCATGTCGAAGACAGCGAGGTAGTCGTTGCACCATTCGTGCAGGTCGCTACTTATGC 1893183 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||| ||||||||||||| |||| Sbjct 1893182 GACAAGGAATTTTGCTACCTTAGGACAGTTA 1893152 >seq5495 Length=1453393 Score = 80.6 bits (88), Expect = 3e-13 Identities = 86/118 (73%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 56 ATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNNNNNNNNNTAC 115 |||||||| || | | ||||||||| | | || | |||||| ||| Sbjct 89874 ATCTTCACAGAGAATTCAATTTCACCGGGTCCATGTCGAAGACAGCAAGGCAGTCATTAC 89815 Query 116 ACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||| ||||| |||||||||||||| ||||||||||| |||| Sbjct 89814 ACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCAATACCTTAGGACAGTTA 89757 >seq2467 Length=3104487 Score = 80.6 bits (88), Expect = 3e-13 Identities = 92/128 (72%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 46 GGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNN 105 |||||| |||||||||| || | | |||||||| || | || | ||||||| Sbjct 2290048 GGTAATTTGCATCTTCACGGAGAATGCAATTTCATTGGGTCCATGTCAGAGACAGCGAGG 2290107 Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165 |||||||||| |||| |||| ||||| || ||||||||| |||||||||| Sbjct 2290108 CAGTCATTACACCATTCATGCAAGTCGCTACTTATGTGATAAGGAATTTTGCTACCTTAG 2290167 Query 166 GACCGTTA 173 ||| |||| Sbjct 2290168 GACAGTTA 2290175 >seq2301 Length=11085951 Score = 80.6 bits (88), Expect = 3e-13 Identities = 92/128 (72%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 46 GGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNN 105 |||| | |||||||||| | | | ||||||||| ||| || | |||||| Sbjct 9382005 GGTACTTCGCATCTTCACGAAGAATTCAATTTCACCGAGTCCATGTCGGAGACAACGAGG 9381946 Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165 |||||||||||||||||| | ||||| | |||||||||||||||||||||| Sbjct 9381945 CAATCGTTACACCATTCGTGCAGGTTGCTACTTATGCAACAAGGAATTTCGCTACCTTAG 9381886 Query 166 GACCGTTA 173 || |||| Sbjct 9381885 GATAGTTA 9381878 >seq16 Length=385534 Score = 80.6 bits (88), Expect = 3e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||||||||||||||||| ||||| ||||||||||||| ||||||||||||| || Sbjct 360454 TACACCATTCGTGCAGGTCGCTACTTAAGCGACAAGGAATTTTGCTACCTTAGGACAGT 360512 >seq453 Length=4878105 Score = 78.8 bits (86), Expect = 1e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || || || ||||||||||||||| |||||||||||||| |||| ||||||||||| Sbjct 704487 TACGCCTTTTGTTCAGGTCGGAACTTACTCGACAAGGAATTTCACTACGTTAGGACCGTT 704546 Query 173 A 173 | Sbjct 704547 A 704547 >seq18 Length=4329289 Score = 77.0 bits (84), Expect = 4e-12 Identities = 106/150 (71%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| ||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 3004255 GGGTCTTTCTATCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 3004196 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | || ||||||| ||| || || | | |||||| ||| |||| Sbjct 3004195 C-CTCTCTTCGAGACAGTGCACAGATCATTACGCCTTTTTTTCGAGTCGGAGCTTTCCCG 3004137 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||| ||||||| Sbjct 3004136 ACAAGGAATTTCGCTACCTTAGAACCGTTA 3004107 >seq3335 Length=2857628 Score = 75.2 bits (82), Expect = 1e-11 Identities = 91/128 (71%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 46 GGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNN 105 |||| || |||||||| || | | |||||||| || | || | ||||||| Sbjct 2818141 GGTACTCCACATCTTCATGGACAATTCAATTTCATTGGGTCCATGTCGGAGACAGCGAGG 2818200 Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165 |||||||||||||||| ||| ||||| | ||||||||||| |||||||||| Sbjct 2818201 CAGTCGTTACACCATTCGTGCAGATCGCTACTTATGCAACAAGGAATTTTGCTACCTTAG 2818260 Query 166 GACCGTTA 173 || |||| Sbjct 2818261 GATAGTTA 2818268 >seq653 Length=6726419 Score = 75.2 bits (82), Expect = 1e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 123 GTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||| ||||||||||||| ||||||| |||||| |||||||||||||||||| Sbjct 4267407 GTGTAGGTCGGAACTTATCCGACAAAGAATTTTGCTACCTTAGGACCGTTA 4267457 >seq531 Length=5369156 Score = 73.4 bits (80), Expect = 4e-11 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 126 CAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || |||||||||||||||||||||||||| ||||||||||||||| || Sbjct 1987608 CATGTCGGAACTTACCCGACAAGGAATTTTGCTACCTTAGGACCGCTA 1987655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547169540454