Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq1813 192 2e-46 seq1814 159 9e-37 >seq1813 Length=181482 Score = 192 bits (212), Expect = 2e-46 Identities = 251/344 (73%), Gaps = 9/344 (3%) Strand=Plus/Minus Query 3 TACCTGAAGAA-TAAGCACCGGCTAA-CTACGTGCCAGCAGCCGCGGTAATACGTAGGGT 60 ||||||||||| |||||| ||||||| | |||||||||||||||||||| ||| || | Sbjct 38089 TACCTGAAGAACTAAGCATCGGCTAAACCCCGTGCCAGCAGCCGCGGTAAGACGGGGGAT 38030 Query 61 GCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGT 120 || ||||||| |||||| | ||||||||||| || |||||| || || || | | | Sbjct 38029 GCGAGCGTTATCCGGAATGATTGGGCGTAAAGGGTCCGCAGGTGGCCCGGTCAGTCCGCT 37970 Query 121 GTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCA 180 || ||| || ||||| |||| ||| || | ||| | | || |||| | | Sbjct 37969 GTCAAAACCTGGGGCTCAACCCTGGAGAGGCGGCGGAGACCACCGGGCTTGAGTCCGGTA 37910 Query 181 GAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAAT 240 | || | |||||||| ||| ||| |||||||||||||| || ||| |||| |||| Sbjct 37909 GGGGCAGAGGGAATTCCCGGTGGAGCGGTGAAATGCGTAGAGATCGGGAAGAACGCCAAG 37850 Query 241 GGCGAAGGCAGCCCCCTGG----GATAAC---ACTGACGCTCATGCACGAAAGCGTGGGG 293 |||||||||| | || | ||| | |||||| |||| | |||| ||| |||| Sbjct 37849 GGCGAAGGCACTCTGCTAGGCCTGATTTCGCGACTGACACTCAGGGACGAGAGCCAGGGG 37790 Query 294 AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||| || ||||||||||||| ||||||| ||| |||||||| Sbjct 37789 AGCGAATGGGATTAGATACCCCAGTAGTCCTGGCCGTAAACGAT 37746 Score = 192 bits (212), Expect = 2e-46 Identities = 251/344 (73%), Gaps = 9/344 (3%) Strand=Plus/Plus Query 3 TACCTGAAGAA-TAAGCACCGGCTAA-CTACGTGCCAGCAGCCGCGGTAATACGTAGGGT 60 ||||||||||| |||||| ||||||| | |||||||||||||||||||| ||| || | Sbjct 141269 TACCTGAAGAACTAAGCATCGGCTAAACCCCGTGCCAGCAGCCGCGGTAAGACGGGGGAT 141328 Query 61 GCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGT 120 || ||||||| |||||| | ||||||||||| || |||||| || || || | | | Sbjct 141329 GCGAGCGTTATCCGGAATGATTGGGCGTAAAGGGTCCGCAGGTGGCCCGGTCAGTCCGCT 141388 Query 121 GTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCA 180 || ||| || ||||| |||| ||| || | ||| | | || |||| | | Sbjct 141389 GTCAAAACCTGGGGCTCAACCCTGGAGAGGCGGCGGAGACCACCGGGCTTGAGTCCGGTA 141448 Query 181 GAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAAT 240 | || | |||||||| ||| ||| |||||||||||||| || ||| |||| |||| Sbjct 141449 GGGGCAGAGGGAATTCCCGGTGGAGCGGTGAAATGCGTAGAGATCGGGAAGAACGCCAAG 141508 Query 241 GGCGAAGGCAGCCCCCTGG----GATAAC---ACTGACGCTCATGCACGAAAGCGTGGGG 293 |||||||||| | || | ||| | |||||| |||| | |||| ||| |||| Sbjct 141509 GGCGAAGGCACTCTGCTAGGCCTGATTTCGCGACTGACACTCAGGGACGAGAGCCAGGGG 141568 Query 294 AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||| || ||||||||||||| ||||||| ||| |||||||| Sbjct 141569 AGCGAATGGGATTAGATACCCCAGTAGTCCTGGCCGTAAACGAT 141612 >seq1814 Length=106468 Score = 159 bits (176), Expect = 9e-37 Identities = 241/337 (72%), Gaps = 13/337 (4%) Strand=Plus/Plus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 ||| || |||| ||| |||||| ||||||||||| |||||||||||| ||| || || | Sbjct 48231 GAAAAAGAAGCCCCGTCTAACTCCGTGCCAGCAGACGCGGTAATACGGGGGGGGCTAGTG 48290 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT-GTGTAAGA-CAGGTGTGAA 125 ||| || |||| | ||||||||||| || || ||||||| | | || ||| | | Sbjct 48291 TTATTCAGAATAATTGGGCGTAAAGGGTACGTAGGCGGTCAGATTGAGCTCAGACCT--A 48348 Query 126 ATCCCCGGGCTTAACCTGGGAA-----TTGCATTTGTGACTGCACGACTAGAGTGTGTCA 180 | || |||||||||| | | ||||| ||| ||| | |||| | | Sbjct 48349 AGCCATAGGCTTAACCTATGGACGGTCTTGCAGCTGTT-CTGTCT---TTGAGTTGGATA 48404 Query 181 GAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAAT 240 | | | |||||||| | ||| || | |||| | ||||||| | ||||| || Sbjct 48405 GGGAAGAGTGGAATTTCTAGTGGAGAGATTAAATTCATAGATATTAGAAGGAAGGCCGGC 48464 Query 241 GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 300 |||||||||| | | | | | ||||||||| | | ||||||||||||||||||||| Sbjct 48465 GGCGAAGGCAACTCTTTAGATCCAGACTGACGCTAAGGTACGAAAGCGTGGGGAGCAAAC 48524 Query 301 AGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||| |||||||||||| |||||||| Sbjct 48525 GGGATTAGATACCCCAGTAGTCCACGCCGTAAACGAT 48561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289576606656