Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq1814 82.4 8e-14 >seq1814 Length=106468 Score = 82.4 bits (90), Expect = 8e-14 Identities = 126/174 (72%), Gaps = 8/174 (5%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||||||| ||| | |||||| | ||| Sbjct 52783 CAAACCGACACAGGTGAACAAGTAGAGAATACTAAGGCG-TTGGGACAATCACCTTGAAG 52841 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAG-GGTCCCTACCCAGAAATGGGAG 142 ||||| |||||| | || | |||||||||||| || | || | || | ||| | ||| Sbjct 52842 GAACTCGGCAAAATCACTCCGTAACTTCGGGAGAAGGAGGGCTCT--CAAGA---GAGAG 52896 Query 143 GGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | ||| |||||||| ||| ||||||| ||||||||||| || ||| || Sbjct 52897 TG-GCACAGAATAGGGGGTGGCGGCTGTTTATTAAAAACACAGGACTCTGCAAA 52949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531190665156