Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1814 75.2 1e-11 seq1813 75.2 1e-11 >seq1814 Length=106468 Score = 75.2 bits (82), Expect = 1e-11 Identities = 68/86 (79%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||| ||||||||||||||||||| |||||||||| || | |||||| || ||| Sbjct 52916 GCGGCTGTTTATTAAAAACACAGGACTCTGCAAAGTACCAATACCATGTATAGAGTCTGA 52975 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAAT 153 | |||||||||||| | ||||| ||| Sbjct 52976 CACCTGCCCGGTGCTGTAAGGTGAAT 53001 >seq1813 Length=181482 Score = 75.2 bits (82), Expect = 1e-11 Identities = 74/96 (77%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| || || |||| || || Sbjct 32188 ACCAGGCCCAAGCGACTGTTTACCAAAAACACAGGTCTCCGCCAAGTTGAAAAACGATGT 32129 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 | ||| |||||||||||| |||| |||||||||| Sbjct 32128 AAGGGGGCTGACGCCTGCCCAGTGCTGGAAGGTTAA 32093 Score = 75.2 bits (82), Expect = 1e-11 Identities = 74/96 (77%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| || || |||| || || Sbjct 147170 ACCAGGCCCAAGCGACTGTTTACCAAAAACACAGGTCTCCGCCAAGTTGAAAAACGATGT 147229 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 | ||| |||||||||||| |||| |||||||||| Sbjct 147230 AAGGGGGCTGACGCCTGCCCAGTGCTGGAAGGTTAA 147265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476791621134