Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1813 318 1e-84 seq1814 210 5e-52 >seq1813 Length=181482 Score = 318 bits (352), Expect = 1e-84 Identities = 292/368 (79%), Gaps = 17/368 (5%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 || || |||||||||| || || | ||||||||||| | | ||||||| |||||| Sbjct 31894 TAGCCCGCATCTTCACAGGCATGTCTATTTCACCGAGCCCCTCTCCGAGACAGCGCCCAA 31953 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||| Sbjct 31954 ATCGTTACGCCTTTCGTGCGGGTCAGAACTTACCTGACAATGAATTTCGCTACCTTAGGA 32013 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC------------ 168 ||||||||||||| |||||||| |||||||||| ||| | ||||| Sbjct 32014 TCGTTATAGTTACGACCGCCGTTGACTGGGGCTTCGGTTGCCAGCTTCCCCCCTCTCAAG 32073 Query 169 GATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACAT 228 || | | | || | ||||||||||||||||| |||||||||||||| || ||||| Sbjct 32074 GAGGGGGCCACCA-ACTTCCTTAACCTTCCAGCACTGGGCAGGCGTCAGCCCCCTTACAT 32132 Query 229 CGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCT 288 ||| || | |||| || || ||||||||||||||||||||||||||||||||| || || Sbjct 32133 CGTTTTTCAACTTGGCGGAGACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTGGTCCCT 32192 Query 289 GCGG--CCTGTCATAGACAG--GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGA 344 |||| || || ||| | ||||| |||||||| |||||||| || |||||||||| Sbjct 32193 GCGGCTCCCCCCAAAGAGGGGAGCACCTCTTCTCCCGAAGTTACGAGGCTATTTTGCCGA 32252 Query 345 GTTCCTTA 352 |||||||| Sbjct 32253 GTTCCTTA 32260 Score = 318 bits (352), Expect = 1e-84 Identities = 292/368 (79%), Gaps = 17/368 (5%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 || || |||||||||| || || | ||||||||||| | | ||||||| |||||| Sbjct 147464 TAGCCCGCATCTTCACAGGCATGTCTATTTCACCGAGCCCCTCTCCGAGACAGCGCCCAA 147405 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||| Sbjct 147404 ATCGTTACGCCTTTCGTGCGGGTCAGAACTTACCTGACAATGAATTTCGCTACCTTAGGA 147345 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC------------ 168 ||||||||||||| |||||||| |||||||||| ||| | ||||| Sbjct 147344 TCGTTATAGTTACGACCGCCGTTGACTGGGGCTTCGGTTGCCAGCTTCCCCCCTCTCAAG 147285 Query 169 GATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACAT 228 || | | | || | ||||||||||||||||| |||||||||||||| || ||||| Sbjct 147284 GAGGGGGCCACCA-ACTTCCTTAACCTTCCAGCACTGGGCAGGCGTCAGCCCCCTTACAT 147226 Query 229 CGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCT 288 ||| || | |||| || || ||||||||||||||||||||||||||||||||| || || Sbjct 147225 CGTTTTTCAACTTGGCGGAGACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTGGTCCCT 147166 Query 289 GCGG--CCTGTCATAGACAG--GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGA 344 |||| || || ||| | ||||| |||||||| |||||||| || |||||||||| Sbjct 147165 GCGGCTCCCCCCAAAGAGGGGAGCACCTCTTCTCCCGAAGTTACGAGGCTATTTTGCCGA 147106 Query 345 GTTCCTTA 352 |||||||| Sbjct 147105 GTTCCTTA 147098 >seq1814 Length=106468 Score = 210 bits (232), Expect = 5e-52 Identities = 262/353 (74%), Gaps = 12/353 (3%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||| ||||| | | | | ||||||| | | Sbjct 53181 TACTCCGCATCTTCACGGAGAATTCAAATTCACTGGGCTCACCTTGGAGACAGCGGGGCA 53122 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||| || || ||| ||| || || | ||| || ||||||||||||||||||||||| Sbjct 53121 GTCGTGACACCATTCATGCAGGACGTTAATTATACGTCAAGGAATTTCGCTACCTTAGGA 53062 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCT-CTAA 179 | |||| |||||| ||||||||||||||||||| |||| ||||| | || | Sbjct 53061 CAGTTAGAGTTACTGCCGCCGTTTACTGGGGCT----TTCA----TTCGAAGCATACTTA 53010 Query 180 CAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239 | ||| || ||||| |||||||||||||| ||||| |||||||| || ||| || Sbjct 53009 CCTCTCCTATTCACCTTACAGCACCGGGCAGGTGTCAGACTCTATACATGGTATTGGTAC 52950 Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC-CTGTC 298 || ||||| ||||||||||| ||||||| ||| |||||||| ||| | || || Sbjct 52949 TTTGCAGAGTCCTGTGTTTTTAATAAACAGCCGCCACCCCCTATTCTGTGCCACTCTCTC 52890 Query 299 ATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 | || | || | ||||||||| ||||||||| || ||||||||||||||||| Sbjct 52889 -TTGAGA-GCCCTCCTTCTCCCGAAGTTACGGAGTGATTTTGCCGAGTTCCTT 52839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062380728064