Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq1813 197 3e-48 seq1814 86.0 1e-14 >seq1813 Length=181482 Score = 197 bits (218), Expect = 3e-48 Identities = 181/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 || || ||| ||| | | |||||| ||||||| | |||||||||||||||| |||||| Sbjct 31713 GGAACCGTGCCAGGCAGACAGTTTCTCTGGGGCAGAGGCCTCCCAAAGAGTAATGGAGGC 31654 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 | ||||| | ||||||| |||| || || || | | |||| ||||||| ||||| | Sbjct 31653 GTGCAAAGGTTCCCTCAGGCTGGACGGGAATCAGTTGTAGAGTGTAAAGGCAGAAGGGAG 31594 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 |||||||| | ||| |||||| |||||||||||||||||| |||| ||||||| |||| Sbjct 31593 CTTGACTGCAAGACCAACAAGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGT 31534 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || | ||||| |||||||||| |||||||||| ||| || |||||| Sbjct 31533 GCCGCGTGGAAGGGCCGTCGCTTATCGGATAAAAGTTACTCTAGGGATA 31485 Score = 197 bits (218), Expect = 3e-48 Identities = 181/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 || || ||| ||| | | |||||| ||||||| | |||||||||||||||| |||||| Sbjct 147645 GGAACCGTGCCAGGCAGACAGTTTCTCTGGGGCAGAGGCCTCCCAAAGAGTAATGGAGGC 147704 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 | ||||| | ||||||| |||| || || || | | |||| ||||||| ||||| | Sbjct 147705 GTGCAAAGGTTCCCTCAGGCTGGACGGGAATCAGTTGTAGAGTGTAAAGGCAGAAGGGAG 147764 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 |||||||| | ||| |||||| |||||||||||||||||| |||| ||||||| |||| Sbjct 147765 CTTGACTGCAAGACCAACAAGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGT 147824 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || | ||||| |||||||||| |||||||||| ||| || |||||| Sbjct 147825 GCCGCGTGGAAGGGCCGTCGCTTATCGGATAAAAGTTACTCTAGGGATA 147873 >seq1814 Length=106468 Score = 86.0 bits (94), Expect = 1e-14 Identities = 148/214 (69%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 127 GGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTC 186 || ||||| |||||| || |||| |||||||||||||| | ||| || ||| Sbjct 53344 GGTAGTTTCCCTGGGGAGGGGTTCTCCTAAAGAGTAACGGAGAAGTGTGAAGGTAAGCTC 53403 Query 187 A-GCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 | ||| | | | || | | || | || || | ||| || |||||| | ||| Sbjct 53404 AAGCTGTGCTTGCGCGCAGCTGTAGAGCGTAATGGTACAAGCTTGCCTGACTGTAAGACC 53463 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 |||||| | ||| |||||||||||| | || |||||||| || | | ||||| ||| Sbjct 53464 TACAAGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGGGCCCCGTGTGGAAGGGC 53523 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||| ||| || |||| ||| | ||||||| Sbjct 53524 CCTCGCTCAACGAATCAAAGGTACGCCGGGGATA 53557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982382179264