Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq1814 104 3e-20 seq1813 86.0 7e-15 >seq1814 Length=106468 Score = 104 bits (114), Expect = 3e-20 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| ||| |||| || |||||||||| || | | ||| ||||||| Sbjct 53206 CGGGGTCTTACCGTCTAGCCGCTGGTACTCCGCATCTTCACGGAGAATTCAAATTCACTG 53147 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||||| | ||||||| ||||||||| |||||| || | ||| | Sbjct 53146 GGCTCACCTTGGAGACAGCGGGGCAGTCGTGACACCATTCATGCAGGACGTTAATTATAC 53087 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 | |||||||||||||||||||||||| |||| Sbjct 53086 GTCAAGGAATTTCGCTACCTTAGGACAGTTA 53056 >seq1813 Length=181482 Score = 86.0 bits (94), Expect = 7e-15 Identities = 106/149 (71%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||||| | |||| | |||||||||| | | | ||||||| ||| Sbjct 31871 GGGTCTTTCTGTCCCAGTGGAGGTAGCCCGCATCTTCACAGGCATGTCTATTTCACCGAG 31930 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | ||||||| ||| || ||||||| |||| ||||||||| || Sbjct 31931 CCCCTCTCCGAGACAGCGCCCAAATCGTTACGCCTTTCGTGCGGGTCAGAACTTACCTGA 31990 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||| ||||||||||||||||||| ||||| Sbjct 31991 CAATGAATTTCGCTACCTTAGGATCGTTA 32019 Score = 86.0 bits (94), Expect = 7e-15 Identities = 106/149 (71%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||||| | |||| | |||||||||| | | | ||||||| ||| Sbjct 147487 GGGTCTTTCTGTCCCAGTGGAGGTAGCCCGCATCTTCACAGGCATGTCTATTTCACCGAG 147428 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | ||||||| ||| || ||||||| |||| ||||||||| || Sbjct 147427 CCCCTCTCCGAGACAGCGCCCAAATCGTTACGCCTTTCGTGCGGGTCAGAACTTACCTGA 147368 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||| ||||||||||||||||||| ||||| Sbjct 147367 CAATGAATTTCGCTACCTTAGGATCGTTA 147339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547190383986