Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1813 205 2e-50 >seq1813 Length=181482 Score = 205 bits (226), Expect = 2e-50 Identities = 305/416 (73%), Gaps = 15/416 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| |||| | | ||||||| |||||| ||| |||||| | ||| | Sbjct 33147 CCACAGCTCAT-CCGCCGA-TCTTTCAACATCGGTCGGTACGGGCCTCCACTCAGTC-TC 33203 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| || |||| |||| || |||||| | ||| || |||||| || | | Sbjct 33204 ACCAAAGCTT-CACCCTGGCCAT-GGTTAGATCACTCGGGTT-CGGGTCCATAAACGAT- 33259 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTAT---TCGGTTAAGCT 185 ||| | ||||| || ||||| ||||| ||||||| | | | ||| | ||| Sbjct 33260 GACATGG-GCCCTTGTCAGACTTGCTTT-CGCTACGGTTTCGGCGTGCATCGCCTTAGCC 33317 Query 186 TTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAG 245 |||||| | || |||||| | | |||| | ||| ||| |||| |||| ||| Sbjct 33318 GTGCCACCGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGGGGTTCAAG 33377 Query 246 TGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305 ||||||| ||||||| || |||||||||| | ||| |||||||||| ||||| ||| Sbjct 33378 CCCCCTCCCACCGCTTGTAAGCTTACGGTTTCATGGTCTTTTTCACTCCC-TCTCCAGGG 33436 Query 306 TTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCC 365 |||||||| || |||||||||||||||||||| |||||||||| ||| ||||||||||| Sbjct 33437 TTCTTTTCACCCTTCCCTCACGGTACTAGTTCGCTATCGGTCATCCAGGAGTATTTAGCC 33496 Query 366 TT-GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || |||| |||||| | || ||||| || |||| ||||| || | ||||||| Sbjct 33497 TTACGAGG-TGGTCCTCGCAGATTCACACGGGATTTCACGTGCCCCATGCTACTCG 33551 Score = 205 bits (226), Expect = 2e-50 Identities = 305/416 (73%), Gaps = 15/416 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| |||| | | ||||||| |||||| ||| |||||| | ||| | Sbjct 146211 CCACAGCTCAT-CCGCCGA-TCTTTCAACATCGGTCGGTACGGGCCTCCACTCAGTC-TC 146155 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| || |||| |||| || |||||| | ||| || |||||| || | | Sbjct 146154 ACCAAAGCTT-CACCCTGGCCAT-GGTTAGATCACTCGGGTT-CGGGTCCATAAACGAT- 146099 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTAT---TCGGTTAAGCT 185 ||| | ||||| || ||||| ||||| ||||||| | | | ||| | ||| Sbjct 146098 GACATGG-GCCCTTGTCAGACTTGCTTT-CGCTACGGTTTCGGCGTGCATCGCCTTAGCC 146041 Query 186 TTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAG 245 |||||| | || |||||| | | |||| | ||| ||| |||| |||| ||| Sbjct 146040 GTGCCACCGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGGGGTTCAAG 145981 Query 246 TGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305 ||||||| ||||||| || |||||||||| | ||| |||||||||| ||||| ||| Sbjct 145980 CCCCCTCCCACCGCTTGTAAGCTTACGGTTTCATGGTCTTTTTCACTCCC-TCTCCAGGG 145922 Query 306 TTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCC 365 |||||||| || |||||||||||||||||||| |||||||||| ||| ||||||||||| Sbjct 145921 TTCTTTTCACCCTTCCCTCACGGTACTAGTTCGCTATCGGTCATCCAGGAGTATTTAGCC 145862 Query 366 TT-GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || |||| |||||| | || ||||| || |||| ||||| || | ||||||| Sbjct 145861 TTACGAGG-TGGTCCTCGCAGATTCACACGGGATTTCACGTGCCCCATGCTACTCG 145807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241577477376