Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq1814 98.7 8e-19 seq1813 75.2 9e-12 >seq1814 Length=106468 Score = 98.7 bits (108), Expect = 8e-19 Identities = 103/134 (77%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| ||||||||||| || | ||| || ||| ||||| ||| |||| Sbjct 50310 CGAGTTGCAGCGAGCAATCCGGACTGGGACAAGATTTAAGG-ATTCGCTCCGCCTTGCGG 50252 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || |||||||| | |||||||| ||||||| ||||| ||||||| |||||| Sbjct 50251 CATTGCTTCCCTCTGTGCTTGCCATTGTAACACGTGTGTAGCCCAGCCCATAAAGGCCAT 50192 Query 122 GAGGACTTGACGTC 135 |||||||||||||| Sbjct 50191 GAGGACTTGACGTC 50178 >seq1813 Length=181482 Score = 75.2 bits (82), Expect = 9e-12 Identities = 111/156 (71%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAG-CTCCCCCTCGCG 60 || ||||||| |||||||||| ||| | ||| | | | || || |||| ||| Sbjct 37246 CGGGTTGCAGCCTACAATCCGAACTGAGGCCGGGTTTACGAGGTCAGGCTGGCCCTTGCG 37305 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || | || | || ||| |||||||| ||||||| |||| || ||||| || Sbjct 37306 GGGTCGCATCTCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCAAAAGGGGCA 37365 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 156 || |||||||| |||||||||||||||||||| || Sbjct 37366 TGTTGACTTGACCTCATCCCCACCTTCCTCCGGCTT 37401 Score = 75.2 bits (82), Expect = 9e-12 Identities = 111/156 (71%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAG-CTCCCCCTCGCG 60 || ||||||| |||||||||| ||| | ||| | | | || || |||| ||| Sbjct 142112 CGGGTTGCAGCCTACAATCCGAACTGAGGCCGGGTTTACGAGGTCAGGCTGGCCCTTGCG 142053 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || | || | || ||| |||||||| ||||||| |||| || ||||| || Sbjct 142052 GGGTCGCATCTCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCAAAAGGGGCA 141993 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 156 || |||||||| |||||||||||||||||||| || Sbjct 141992 TGTTGACTTGACCTCATCCCCACCTTCCTCCGGCTT 141957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415992689580