Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq1813 237 4e-60 seq1814 150 4e-34 >seq1813 Length=181482 Score = 237 bits (262), Expect = 4e-60 Identities = 292/397 (74%), Gaps = 19/397 (5%) Strand=Plus/Plus Query 18 GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCC 77 ||||||| || | |||||||||| || | |||||||| ||||||||| | || ||||| Sbjct 38135 GGCCTTCATCCTCCACGCGGCATTGCCCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCT 38194 Query 78 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCT 137 |||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||| Sbjct 38195 CACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCT 38254 Query 138 CTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCC 197 ||||||||||| | |||||| |||| || |||||||||||| |||||||||||||| Sbjct 38255 CTCAGACCAGCAACTGATCGTTGCCTTGGGAGGCCATTACCCCCCCAACTAGCTAATCAG 38314 Query 198 ATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACGTTA 257 | | | ||| || ||| | | ||| || || | | || Sbjct 38315 ACGCAAGCCCCTCC----CTG---GGC------GGATCTCTCCTTTCCCTCCTCAGGATA 38361 Query 258 TGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGACAT 317 || ||||||||| |||||||||| ||||||||||||| ||||| | | | | | Sbjct 38362 TGGGGTATTAGCAGCCGTTTCCAGCTGTTATCCCCCTCCCAGGGGCAGGTCCTTACGCGT 38421 Query 318 TACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACT 377 | |||||||||||||||| || || | | | || | | || |||| | ||| Sbjct 38422 TCCTCACCCGTCCGCCAC---TCCGCCATTCCTCGAGAGG---CATGGCGCCGTGCAACT 38475 Query 378 TGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||| |||| |||||||| ||||| Sbjct 38476 TGCATGTGTTAGGCAAACCGCTAGCGTTCATCCTGAG 38512 Score = 237 bits (262), Expect = 4e-60 Identities = 292/397 (74%), Gaps = 19/397 (5%) Strand=Plus/Minus Query 18 GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCC 77 ||||||| || | |||||||||| || | |||||||| ||||||||| | || ||||| Sbjct 141223 GGCCTTCATCCTCCACGCGGCATTGCCCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCT 141164 Query 78 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCT 137 |||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||| Sbjct 141163 CACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCT 141104 Query 138 CTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCC 197 ||||||||||| | |||||| |||| || |||||||||||| |||||||||||||| Sbjct 141103 CTCAGACCAGCAACTGATCGTTGCCTTGGGAGGCCATTACCCCCCCAACTAGCTAATCAG 141044 Query 198 ATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACGTTA 257 | | | ||| || ||| | | ||| || || | | || Sbjct 141043 ACGCAAGCCCCTCC----CTG---GGC------GGATCTCTCCTTTCCCTCCTCAGGATA 140997 Query 258 TGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGACAT 317 || ||||||||| |||||||||| ||||||||||||| ||||| | | | | | Sbjct 140996 TGGGGTATTAGCAGCCGTTTCCAGCTGTTATCCCCCTCCCAGGGGCAGGTCCTTACGCGT 140937 Query 318 TACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACT 377 | |||||||||||||||| || || | | | || | | || |||| | ||| Sbjct 140936 TCCTCACCCGTCCGCCAC---TCCGCCATTCCTCGAGAGG---CATGGCGCCGTGCAACT 140883 Query 378 TGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||| |||| |||||||| ||||| Sbjct 140882 TGCATGTGTTAGGCAAACCGCTAGCGTTCATCCTGAG 140846 >seq1814 Length=106468 Score = 150 bits (166), Expect = 4e-34 Identities = 133/166 (80%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 31 CACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCC 90 ||| ||| || |||| ||||||||| |||||||||| ||| ||||| ||||||||||||| Sbjct 48167 CACTCGGTATTGCTGGATCAGGCTTTCGCCCATTGTCCAAGATTCCTCACTGCTGCCTCC 48108 Query 91 CGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA 150 ||| ||||||| | |||| ||||||| |||||||||| | ||| || || || |||| Sbjct 48107 CGTGGGAGTCTAGGCCGTATCTCAGTCCCAGTGTGGCCGATCACCCGAAAAGGCCGGCTA 48048 Query 151 GGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCC 196 ||||||| | || ||| |||||| || ||||||| ||||||| Sbjct 48047 CGGATCGTTGGCTTGGTAAGCCATTTCCTTACCAACTACCTAATCC 48002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222377825664