Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1813 201 4e-49 seq1814 105 2e-20 >seq1813 Length=181482 Score = 201 bits (222), Expect = 4e-49 Identities = 368/530 (69%), Gaps = 13/530 (2%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||| || ||||||||| ||||||||||| ||||| | ||| | || ||||| Sbjct 33249 GACCCGAACCCGAGTGATCTAACCATGGCCAGGGTGAAGCTTTGGTGAGACTGAGTGGAG 33190 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 | ||| ||| || ||||||||| || | ||||||||||||| ||||||||||| || | Sbjct 33189 GCCCGTACCGACCGATGTTGAAAGATCGGCGGATGAGCTGTGGTTAGGGGTGAAATGCCA 33130 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAG--GTAGTG--CCTCAAGT 210 | | |||| ||| |||||||||||| |||||| || || | || | || || Sbjct 33129 ATCGAACTCGGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCGGTGTTCGAGG 33070 Query 211 ATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCAT 270 | | | |||||| ||||||||| | | | ||| | | | ||||||| | Sbjct 33069 GTGGGC--CAGGGGTAAAGCACTGTT-TCGGTGCGGGCTGCGAGAGCGGTACCAAATCGA 33013 Query 271 TGCAAACTCCGAATGCGCATCAGTTTTACCG--CGGGAGTGAGGGCATGGGTGCTAAGGT 328 |||||||| |||| | | || ||| | |||||| | ||| | |||| | Sbjct 33012 GGCAAACTCTGAATACTGGCCCTGCTTGCCGAACACCAGTGAGACGAAGGGGGATAAGCT 32953 Query 329 CCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGT 388 | | ||||||| ||| | || ||| ||| ||||||||||| ||||| | ||||||| Sbjct 32952 TCTTTGTCGAGAGGGGAACAGCCCAGACCATCGGCTAAGGCCCCCAAATGGCCGCTAAGT 32893 Query 389 TAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCA 448 | || || || || |||| ||||||| |||| ||| || | |||||||||| | Sbjct 32892 --GGCAAAGGATGTGGGAGTGCTCAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCC 32836 Query 449 TTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTAT 508 |||||||||||||||| |||||||| || || || ||| | || | |||| | Sbjct 32835 TTTAAAGAGTGCGTAATAGCTCACTGATCAAGCGCTCCCGCGCCAAAGATGAACGGGACT 32776 Query 509 TAAGTTGTCTACCGAAGCAGTGGGATCATTTATATGATCGGTAGGGGAGC 558 ||| | || |||| || |||||| | | | |||||||||||||| Sbjct 32775 CAAGCGGCCTGCCGAGGCCATGGGAT-GTAAAAAGCATCGGTAGGGGAGC 32727 Score = 201 bits (222), Expect = 4e-49 Identities = 368/530 (69%), Gaps = 13/530 (2%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||| || ||||||||| ||||||||||| ||||| | ||| | || ||||| Sbjct 146109 GACCCGAACCCGAGTGATCTAACCATGGCCAGGGTGAAGCTTTGGTGAGACTGAGTGGAG 146168 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 | ||| ||| || ||||||||| || | ||||||||||||| ||||||||||| || | Sbjct 146169 GCCCGTACCGACCGATGTTGAAAGATCGGCGGATGAGCTGTGGTTAGGGGTGAAATGCCA 146228 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAG--GTAGTG--CCTCAAGT 210 | | |||| ||| |||||||||||| |||||| || || | || | || || Sbjct 146229 ATCGAACTCGGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCGGTGTTCGAGG 146288 Query 211 ATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCAT 270 | | | |||||| ||||||||| | | | ||| | | | ||||||| | Sbjct 146289 GTGGGC--CAGGGGTAAAGCACTGTT-TCGGTGCGGGCTGCGAGAGCGGTACCAAATCGA 146345 Query 271 TGCAAACTCCGAATGCGCATCAGTTTTACCG--CGGGAGTGAGGGCATGGGTGCTAAGGT 328 |||||||| |||| | | || ||| | |||||| | ||| | |||| | Sbjct 146346 GGCAAACTCTGAATACTGGCCCTGCTTGCCGAACACCAGTGAGACGAAGGGGGATAAGCT 146405 Query 329 CCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGT 388 | | ||||||| ||| | || ||| ||| ||||||||||| ||||| | ||||||| Sbjct 146406 TCTTTGTCGAGAGGGGAACAGCCCAGACCATCGGCTAAGGCCCCCAAATGGCCGCTAAGT 146465 Query 389 TAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCA 448 | || || || || |||| ||||||| |||| ||| || | |||||||||| | Sbjct 146466 --GGCAAAGGATGTGGGAGTGCTCAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCC 146522 Query 449 TTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTAT 508 |||||||||||||||| |||||||| || || || ||| | || | |||| | Sbjct 146523 TTTAAAGAGTGCGTAATAGCTCACTGATCAAGCGCTCCCGCGCCAAAGATGAACGGGACT 146582 Query 509 TAAGTTGTCTACCGAAGCAGTGGGATCATTTATATGATCGGTAGGGGAGC 558 ||| | || |||| || |||||| | | | |||||||||||||| Sbjct 146583 CAAGCGGCCTGCCGAGGCCATGGGAT-GTAAAAAGCATCGGTAGGGGAGC 146631 >seq1814 Length=106468 Score = 105 bits (116), Expect = 2e-20 Identities = 126/170 (74%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTA-ACACGCCCTGGA 93 ||||||||| | | ||| ||| |||||| |||| ||||| ||| ||| | |||| Sbjct 51714 GACCCGAAATCGATTGAGCTAGCCATGGGCAGGTTGAAGCGGCGCCCGACAGCACGTGGA 51773 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 | ||||| | || ||| | |||| || | |||| |||||| |||||||||||||| Sbjct 51774 AGACCGAATTCGTTACTGTGGCAAAAGTATGAAATGACCTGTGGCTAGGGGTGAAAGGCC 51833 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 | |||| | | | |||||||||| | | ||||| |||||||||||| || Sbjct 51834 TATCAAAATCGAAGATAGCTGGTTTTTTGCGAAATCTATTTAGGTAGAGC 51883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689569350656