Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq1813 154 3e-35 seq1814 102 2e-19 >seq1813 Length=181482 Score = 154 bits (170), Expect = 3e-35 Identities = 214/298 (72%), Gaps = 20/298 (7%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTT-AGCCGATGCTTA-TTCATAAGGTACATACAAGCTCCCACAC 58 |||||||||||||| ||| |||||||||||| ||| | |||||| || ||| Sbjct 38047 GGCTGCTGGCACGGGGTTTAGCCGATGCTTAGTTCTTCAGGTACCGTCAT-CTC------ 38099 Query 59 GTGGAAGGTTTTATTCCCTTATA-AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCA 117 || || || || |||||||||||| | || | | |||||||||| || Sbjct 38100 ----------TTCGTCTCTGATCTAAAGAAGTTTACGACCCATTGGGCCTTCATCCTCCA 38149 Query 118 CGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCG 177 ||| | | || |||| || ||| |||||| || ||||||||||||||||||||| Sbjct 38150 CGCGGCATTGCCCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCTCACTGCTGCCTCCCG 38209 Query 178 TAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATC 237 ||||||| ||| |||||||||||| ||| ||||| || | |||||||||| | | | Sbjct 38210 TAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCAACT 38269 Query 238 CATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 ||||| | || || |||| ||||||| || |||| ||||| ||||| ||| || Sbjct 38270 GATCGTTGCCTTGGGAGGCCATTACCCCCCCAACTAGCTAATCAGACGCAAGCCCCTC 38327 Score = 154 bits (170), Expect = 3e-35 Identities = 214/298 (72%), Gaps = 20/298 (7%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTT-AGCCGATGCTTA-TTCATAAGGTACATACAAGCTCCCACAC 58 |||||||||||||| ||| |||||||||||| ||| | |||||| || ||| Sbjct 141311 GGCTGCTGGCACGGGGTTTAGCCGATGCTTAGTTCTTCAGGTACCGTCAT-CTC------ 141259 Query 59 GTGGAAGGTTTTATTCCCTTATA-AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCA 117 || || || || |||||||||||| | || | | |||||||||| || Sbjct 141258 ----------TTCGTCTCTGATCTAAAGAAGTTTACGACCCATTGGGCCTTCATCCTCCA 141209 Query 118 CGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCG 177 ||| | | || |||| || ||| |||||| || ||||||||||||||||||||| Sbjct 141208 CGCGGCATTGCCCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCTCACTGCTGCCTCCCG 141149 Query 178 TAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATC 237 ||||||| ||| |||||||||||| ||| ||||| || | |||||||||| | | | Sbjct 141148 TAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCAACT 141089 Query 238 CATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 ||||| | || || |||| ||||||| || |||| ||||| ||||| ||| || Sbjct 141088 GATCGTTGCCTTGGGAGGCCATTACCCCCCCAACTAGCTAATCAGACGCAAGCCCCTC 141031 >seq1814 Length=106468 Score = 102 bits (112), Expect = 2e-19 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186 ||||| |||| || ||| |||||| |||| |||||||||||||||||||||| ||||| | Sbjct 48156 GCTGGATCAGGCTTTCGCCCATTGTCCAAGATTCCTCACTGCTGCCTCCCGTGGGAGTCT 48097 Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGG 246 | |||| ||||||| ||| ||||| || | || || | ||| ||||| || Sbjct 48096 AGGCCGTATCTCAGTCCCAGTGTGGCCGATCACCCGAAAAGGCCGGCTACGGATCGTTGG 48037 Query 247 CTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 || ||| ||| || || || |||||||||| ||||| | |||| Sbjct 48036 CTTGGTAAGCCATTTCCTTACCAACTACCTAATCCGACGCAAGCTCATC 47988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068780611968