Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1263 100 1e-15 seq1191 84.2 9e-11 >seq1263 Length=58702 Score = 100 bits (110), Expect = 1e-15 Identities = 125/171 (73%), Gaps = 3/171 (2%) Strand=Plus/Minus Query 351102 TCTCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGTTGATGCCGATGG 351161 ||||||| |||||||||||||||||||||||| |||||| || |||||| || || || Sbjct 9945 TCTCGTCGCCGTCAAAGTCGGCGTTGTAGGGCGTGGTGACGGAGAGGTTGAGGCGGAAGG 9886 Query 351162 TGTAGCCCCGCGGGTTGCGCCTCACGCGGTGCACCATGATGGACCCGTTGTGGAGCGTGG 351221 || || | || | | | |||||| ||||||||||| ||||| |||| | Sbjct 9885 TGGAGTAGTTC---ATGATCTTGATGCGGTGGCCCATGATGGACATCTTGTGAAGCGACG 9829 Query 351222 GCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCCACCT 351272 |||| || ||| | | | |||||| |||| || ||||| |||||||| Sbjct 9828 GCTGCCGGTTGAACAGCACCACGTCGCCGTCGCACAGGTGCCGCTCCACCT 9778 >seq1191 Length=50243 Score = 84.2 bits (92), Expect = 9e-11 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 220462 GGCCTTTAAGGAGGAGGTCAAGGTCATGACGTCGCTGC-GCCATCCCAACGTGGTGCTCT 220520 || ||| |||| ||| |||| |||| || |||||| |||| |||||||| || |||| Sbjct 16454 GGACTTCAAGGCCGAGTTCAACATCATC-CGCCGCTGCCGCCACCCCAACGTCGTCCTCT 16396 Query 220521 TCATGGGAGCCTGCACCAAGGCGCCCAACCTGTGCATCATCATGGAGT 220568 ||||||| ||| ||||||| |||||||||| | |||| ||| |||| Sbjct 16395 TCATGGGCGCCGTCACCAAGCCGCCCAACCTCTCCATCGTCACCGAGT 16348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084689564965572