Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016
41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq2067 174 3e-41
>seq2067
Length=7856
Score = 174 bits (192), Expect = 3e-41
Identities = 176/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||| | |||| | |||||| ||||||| |||||||||| ||||||||||
Sbjct 1773 GGGACATTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGT 1832
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230
| ||||| | |||||| |||| ||||| || | |||||||||||| ||||| |
Sbjct 1833 GTGCAAAGGTTTCCTCAGGCTGGACGGAAATCAGCCTTCGAGTGCAAAGGCAGAAGGGAG 1892
Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290
|||||||| | || | ||| |||||||||||||||||| |||| ||||||| ||||
Sbjct 1893 CTTGACTGCAAGACATACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGT 1952
Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| | ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 1953 ACCAAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 2001
Score = 174 bits (192), Expect = 3e-41
Identities = 176/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||| | |||| | |||||| ||||||| |||||||||| ||||||||||
Sbjct 6675 GGGACATTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGT 6734
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230
| ||||| | |||||| |||| ||||| || | |||||||||||| ||||| |
Sbjct 6735 GTGCAAAGGTTTCCTCAGGCTGGACGGAAATCAGCCTTCGAGTGCAAAGGCAGAAGGGAG 6794
Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290
|||||||| | || | ||| |||||||||||||||||| |||| ||||||| ||||
Sbjct 6795 CTTGACTGCAAGACATACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGT 6854
Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| | ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 6855 ACCAAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 6903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982359358112
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |