Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq4020 194 2e-47 >seq4020 Length=382506 Score = 194 bits (214), Expect = 2e-47 Identities = 162/195 (83%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct 322880 TCTAGAAACCAACAAAATAGAAACGCACGTCCTATTTTATTATTCCATGCTAATATATTC 322939 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTC-CG 123 |||| | |||||||||||||||||||||||| |||| ||||||||||||||||| | Sbjct 322940 GGGCAAATGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCATA 322999 Query 124 CACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGT-ACTC 180 |||||||| || | ||| | || ||||||||||| | | | || | ||||| || | Sbjct 323000 CACACCAAGTAAATGACATGCAGGATCACCAAGAGGGAAGACCCGGCCAAGCAGTAACAC 323059 Query 181 GCCGTGAGGCGGACC 195 || |||| ||||||| Sbjct 323060 GCTGTGAAGCGGACC 323074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595176146058