Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq2067 82.4 5e-14 >seq2067 Length=7856 Score = 82.4 bits (90), Expect = 5e-14 Identities = 91/119 (76%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCA-TTCATAGCCACCGGATCACTATGACCT 59 || |||||||||||||||||| |||||||||| || || || |||||||||| | || Sbjct 1990 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTTGGTA-CCGTCGGATCACTAAGGCCG 1932 Query 60 GCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || ||| ||| |||||| | ||| |||| ||||||| Sbjct 1931 ACTTTCGTCCCTGCTCGACGGGTATGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 1873 Score = 82.4 bits (90), Expect = 5e-14 Identities = 91/119 (76%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCA-TTCATAGCCACCGGATCACTATGACCT 59 || |||||||||||||||||| |||||||||| || || || |||||||||| | || Sbjct 6892 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTTGGTA-CCGTCGGATCACTAAGGCCG 6834 Query 60 GCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || ||| ||| |||||| | ||| |||| ||||||| Sbjct 6833 ACTTTCGTCCCTGCTCGACGGGTATGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 6775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351986347900