Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq4020 232 7e-59 >seq4020 Length=382506 Score = 232 bits (256), Expect = 7e-59 Identities = 166/190 (87%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| Sbjct 322994 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATTTGCCCGAATA 322935 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| |||||||||||| ||||||||||||| ||||||||||| ||||||||| | || Sbjct 322934 TATTAGCATGGAATAATAAAATAGGACGTGCGTTTCTATTTTGTTGGTTTCTAGAATCG- 322876 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||| ||||| | ||||| || |||| ||||||||||| Sbjct 322875 CCGTAATGATTAATAGGGACAGTTGGGGGCATTTGTATTTCATGGTCAGAGGTGAAATTC 322816 Query 181 TTGGATTTAT 190 ||||||| || Sbjct 322815 TTGGATTCAT 322806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511979480480