Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq1251 84.2 4e-14 >seq1251 Length=242693 Score = 84.2 bits (92), Expect = 4e-14 Identities = 96/128 (75%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 100 GGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCC 159 ||||||| |||| | || || || || || || |||||||| || |||| || || Sbjct 161285 GGAAGGCCTCTT-GAGGTATGTCAACAGATCCAACCCGCTTCATCCGCCTTTTGCCCTCC 161343 Query 160 TTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGT 219 ||||||||||| || |||||||| || || ||||| || || |||||||| ||||| Sbjct 161344 TTTTGCTTCTCCAGAAGCTTGCGTTTTCGTGACACGTCTCCTCCATAGCATTTTGCCAGA 161403 Query 220 ACGTTCTT 227 || ||||| Sbjct 161404 ACATTCTT 161411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838365315392