Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physcomitrella_20patens_20[refseq_20GCF_5F000002425.3_202007-12-14] 1,990 sequences; 477,947,608 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq1990 91.5 1e-16 >seq1990 Length=122890 Score = 91.5 bits (100), Expect = 1e-16 Identities = 93/119 (78%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCA-TTCATAGCCACCGGATCACTATGACCT 59 || |||||||||||||||||| |||||||||| || || || |||||||||| | || Sbjct 92417 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTTGGTA-CCGTCGGATCACTAAGGCCG 92359 Query 60 GCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | | || | ||| ||| |||||| | |||||||| || |||| Sbjct 92358 ACTTTCGTCCCTGCTCGACTGGTAGGTCTTGCAGTCAAGCTCCCTTTTGCCTTTACACT 92300 Score = 91.5 bits (100), Expect = 1e-16 Identities = 93/119 (78%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCA-TTCATAGCCACCGGATCACTATGACCT 59 || |||||||||||||||||| |||||||||| || || || |||||||||| | || Sbjct 115685 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTTGGTA-CCGTCGGATCACTAAGGCCG 115743 Query 60 GCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | | || | ||| ||| |||||| | |||||||| || |||| Sbjct 115744 ACTTTCGTCCCTGCTCGACTGGTAGGTCTTGCAGTCAAGCTCCCTTTTGCCTTTACACT 115802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351993433000