Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physcomitrella_20patens_20[refseq_20GCF_5F000002425.3_202007-12-14] 1,990 sequences; 477,947,608 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq1944 104 4e-20 >seq1944 Length=2275928 Score = 104 bits (114), Expect = 4e-20 Identities = 106/137 (77%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 100 GGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCC 159 |||| ||||||| | || || |||||||| || ||||||||||| ||||| || || || Sbjct 617325 GGAAAGCTTCTT-GCGGGATGTCCACGTTACCTACTCGCTTCATCCGTTTCTTGCCTTCC 617267 Query 160 TTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGT 219 ||||| ||||| || || || | ||| ||||| || || || ||||| || || ||||| Sbjct 617266 TTTTGTTTCTCCAGAAGTTTTCTCTTGCGGCTCACATCTCCTCCGTAACACTTAGCCAGC 617207 Query 220 ACGTTCTTTCTGAGAGC 236 || ||||| || | ||| Sbjct 617206 ACATTCTTCCTCAAAGC 617190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838383315840