Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physcomitrella_20patens_20[refseq_20GCF_5F000002425.3_202007-12-14] 1,990 sequences; 477,947,608 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1455 125 1e-26 seq1447 125 1e-26 seq1326 125 1e-26 seq806 125 1e-26 seq768 125 1e-26 seq743 125 1e-26 seq661 125 1e-26 seq512 125 1e-26 seq1656 118 2e-24 seq504 118 2e-24 seq1814 102 1e-19 seq624 78.8 2e-12 >seq1455 Length=103077 Score = 125 bits (138), Expect = 1e-26 Identities = 103/123 (84%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 1769 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 1712 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| || |||||||| |||||||||||||||||||||||||||| | Sbjct 1711 GACGCGAAGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCTA 1652 Query 121 GAA 123 ||| Sbjct 1651 GAA 1649 Score = 125 bits (138), Expect = 1e-26 Identities = 103/123 (84%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 34450 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 34393 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| || |||||||| |||||||||||||||||||||||||||| | Sbjct 34392 GACGCGAAGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCTA 34333 Query 121 GAA 123 ||| Sbjct 34332 GAA 34330 Score = 120 bits (132), Expect = 5e-25 Identities = 103/124 (83%), Gaps = 3/124 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 43952 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 43895 Query 61 G-CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119 | | ||||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct 43894 GACNGCGAAGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCT 43835 Query 120 AGAA 123 |||| Sbjct 43834 AGAA 43831 >seq1447 Length=60732 Score = 125 bits (138), Expect = 1e-26 Identities = 103/123 (84%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 2404 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 2461 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| || |||||||| |||||||||||||||||||||||||||| | Sbjct 2462 GACGCGAAGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCTA 2521 Query 121 GAA 123 ||| Sbjct 2522 GAA 2524 Score = 125 bits (138), Expect = 1e-26 Identities = 103/123 (84%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 39139 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 39196 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| || |||||||| |||||||||||||||||||||||||||| | Sbjct 39197 GACGCGAAGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCTA 39256 Query 121 GAA 123 ||| Sbjct 39257 GAA 39259 Score = 118 bits (130), Expect = 2e-24 Identities = 103/124 (83%), Gaps = 3/124 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 37332 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 37389 Query 61 GCCGCGA-AGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119 | ||||| ||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct 37390 GACGCGANAGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCT 37449 Query 120 AGAA 123 |||| Sbjct 37450 AGAA 37453 >seq1326 Length=55463 Score = 125 bits (138), Expect = 1e-26 Identities = 103/123 (84%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 2332 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 2275 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| || |||||||| |||||||||||||||||||||||||||| | Sbjct 2274 GACGCGAAGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCTA 2215 Query 121 GAA 123 ||| Sbjct 2214 GAA 2212 >seq806 Length=8462 Score = 125 bits (138), Expect = 1e-26 Identities = 103/123 (84%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 7880 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 7823 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| || |||||||| |||||||||||||||||||||||||||| | Sbjct 7822 GACGCGAAGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCTA 7763 Query 121 GAA 123 ||| Sbjct 7762 GAA 7760 >seq768 Length=9906 Score = 125 bits (138), Expect = 1e-26 Identities = 103/123 (84%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 1682 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 1739 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| || |||||||| |||||||||||||||||||||||||||| | Sbjct 1740 GACGCGAAGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCTA 1799 Query 121 GAA 123 ||| Sbjct 1800 GAA 1802 >seq743 Length=9445 Score = 125 bits (138), Expect = 1e-26 Identities = 103/123 (84%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 709 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGANAAGCCAGT 766 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| || |||||||| |||||||||||||||||||||||||||| | Sbjct 767 GACGCGAAGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCTA 826 Query 121 GAA 123 ||| Sbjct 827 GAA 829 >seq661 Length=9389 Score = 125 bits (138), Expect = 1e-26 Identities = 103/123 (84%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 7600 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 7543 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| || |||||||| |||||||||||||||||||||||||||| | Sbjct 7542 GACGCGAAGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCTA 7483 Query 121 GAA 123 ||| Sbjct 7482 GAA 7480 >seq512 Length=8796 Score = 125 bits (138), Expect = 1e-26 Identities = 103/123 (84%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 8306 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 8249 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||| || |||||||| |||||||||||||||||||||||||||| | Sbjct 8248 GACGCGAAGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCTA 8189 Query 121 GAA 123 ||| Sbjct 8188 GAA 8186 >seq1656 Length=448124 Score = 118 bits (130), Expect = 2e-24 Identities = 103/124 (83%), Gaps = 3/124 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 24867 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 24810 Query 61 GCCGCGAAG-CTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119 | ||||||| ||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct 24809 GACGCGAAGGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCT 24750 Query 120 AGAA 123 |||| Sbjct 24749 AGAA 24746 Score = 86.0 bits (94), Expect = 1e-14 Identities = 93/123 (76%), Gaps = 13/123 (11%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 1699 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 1642 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||| || || |||||||| |||||||||||||||||||||||||||| | Sbjct 1641 GCC-----------ATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCTA 1593 Query 121 GAA 123 ||| Sbjct 1592 GAA 1590 >seq504 Length=8749 Score = 118 bits (130), Expect = 2e-24 Identities = 103/124 (83%), Gaps = 3/124 (2%) Strand=Plus/Minus Query 1 GTACGA-GAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAG 59 |||||| ||||||||| || |||| | |||||||| ||||| || ||| || ||| Sbjct 8708 GTACGANGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAG 8651 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119 || |||||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct 8650 TGACGCGAAGCTACCATGTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGCT 8591 Query 120 AGAA 123 |||| Sbjct 8590 AGAA 8587 >seq1814 Length=924488 Score = 102 bits (112), Expect = 1e-19 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | || |||| | |||||||| ||||| || ||| || |||| Sbjct 687180 GTACGAGAGGAACAGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 687123 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||| || || |||||||| ||||| |||||||| ||||||||||||| | Sbjct 687122 GACGCTAAGCTACTATGTGTAGGATTATGACTGAATGCCTCTAACTCAGAATCCATGCTA 687063 Query 121 GAA 123 ||| Sbjct 687062 GAA 687060 >seq624 Length=9358 Score = 78.8 bits (86), Expect = 2e-12 Identities = 76/95 (80%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| ||||| || ||| || |||| Sbjct 881 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATTGCGTTTGGTTGAAAAGCCAGT 938 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAA 95 | |||||||||||||| || |||||||| ||||| Sbjct 939 GACGCGAAGCTACCATGTGTAGGATTATGACTGAA 973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819184207360