Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq24289 161 2e-37 >seq24289 Length=447 Score = 161 bits (178), Expect = 2e-37 Identities = 195/267 (73%), Gaps = 9/267 (3%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | | ||||||||||| | ||| | ||| ||||||| || ||||| Sbjct 290 GCATCTTCACGGAGGATTCAATTTCACCGGGTCCATGCTGGGGACAGCGGGGCGGTCGTT 231 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || | |||||||||||||| ||||| |||||||||||||||||||||| |||| |||| Sbjct 230 ACACTATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTGGGACAGTTA 171 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192 ||||| |||||||||| ||||| |||| | | | || | |||||| Sbjct 170 GAGTTACTGCCGCCGTTTGCCGGGACTTCCCCCCGGGGACTCTC---------CCCCATG 120 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252 || || ||| |||||||||| | |||| || | |||| || || | || || | Sbjct 119 CCTTCGCCGTCCAGCACCGGGCAAGTGTCAGACACCATACCTCGTGTTACCACTTCGCGG 60 Query 253 AGTGCTGTGTTTTTAATAAACAGTCGC 279 | ||||||||||||| ||||||||| Sbjct 59 TGCCCTGTGTTTTTAATGAACAGTCGC 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1259464636288