Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq4010 176 2e-42 seq73618 73.4 2e-11 seq73599 73.4 2e-11 seq54570 73.4 2e-11 >seq4010 Length=475 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 42 GGAGAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 101 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||| |||||||||||||||||||||| Sbjct 102 CCGAATCCCCGCCCCGCGGCGGGGCGCGGGACATGTGGCGTA 143 >seq73618 Length=967 Score = 73.4 bits (80), Expect = 2e-11 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAG 58 ||||||||||||||| |||||| || |||||||||||| |||| || |||||||||| Sbjct 340 GGAAAAGAAACTAACAAGGATTTCCATAGTAACGGCGAGCGAACTGGAAAGAGCCCAG 283 >seq73599 Length=669 Score = 73.4 bits (80), Expect = 2e-11 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAG 58 ||||||||||||||| |||||| || |||||||||||| |||| || |||||||||| Sbjct 91 GGAAAAGAAACTAACAAGGATTTCCATAGTAACGGCGAGCGAACTGGAAAGAGCCCAG 148 >seq54570 Length=557 Score = 73.4 bits (80), Expect = 2e-11 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAG 58 ||||||||||||||| |||||| || |||||||||||| |||| || |||||||||| Sbjct 49 GGAAAAGAAACTAACTAGGATTTCCAAAGTAACGGCGAGCGAACTGGAAAGAGCCCAG 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230171225760