Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq24289 147 5e-33 >seq24289 Length=447 Score = 147 bits (162), Expect = 5e-33 Identities = 196/268 (73%), Gaps = 11/268 (4%) Strand=Plus/Minus Query 7 GCATCTTCACCG-GGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGT 65 |||||||||| | ||||| ||||||||||| ||| || | | ||||| | |||| Sbjct 290 GCATCTTCACGGAGGATT-CAATTTCACCGGGTCCATGCTGGGGACAGCGGGGCGGTCGT 232 Query 66 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 125 ||| | ||||||| ||||| ||||| |||||||||||||||||||||| |||| ||| Sbjct 231 TACACTATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTGGGACAGTT 172 Query 126 ATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATC 185 | |||||| |||||||||| | ||| | ||| | | || |||| | || Sbjct 171 AGAGTTACTGCCGCCGTTTGCCGGG-----ACTTCCCCCCGGGGA---CTCTCCCCCAT- 121 Query 186 CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCA 245 |||| || |||||||||||||| | ||||| | |||| |||| || | |||| || Sbjct 120 GCCTTCGCCGTCCAGCACCGGGCAAGTGTCAGACACCATACCTCGTGTTACCACTTCGCG 61 Query 246 GAAACCTGTGTTTTTGGTAAACAGTCGC 273 | ||||||||||| | ||||||||| Sbjct 60 GTGCCCTGTGTTTTTAATGAACAGTCGC 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1061274769664