Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Selaginella_20kraussiana_20[genbank_20GCA_5F001021135.1_202015-06- 05] 105,914 sequences; 114,502,747 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq24289 89.7 6e-16 >seq24289 Length=447 Score = 89.7 bits (98), Expect = 6e-16 Identities = 108/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || || | || |||||||||| || | ||||||||| | Sbjct 321 CGGGGTCTTACCGTCTAGCCGTGGTCACTCCGCATCTTCACGGAGGATTCAATTTCACCG 262 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | | | ||||| ||||| |||||||||||||| ||||| | Sbjct 261 GGTCCATGCTGGGGACAGCGGGGCGGTCGTTACACTATTCGTGCAGGTCGCTACTTATGC 202 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||| |||| |||| Sbjct 201 GACAAGGAATTTCGCTACCTTGGGACAGTTA 171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546638549886